Gilvimarinus japonicus: R50076_24930
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Entry
R50076_24930 CDS
T10758
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
R50076_24930 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gjp01007
]
R50076_24930 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gjp03016
]
R50076_24930 (lysS)
Enzymes [BR:
gjp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
R50076_24930 (lysS)
Amino acid related enzymes [BR:
gjp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
R50076_24930 (lysS)
Transfer RNA biogenesis [BR:
gjp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
R50076_24930 (lysS)
Prokaryotic type
Other AARSs
R50076_24930 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BFM21444
LinkDB
All DBs
Position
complement(2928344..2929834)
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AA seq
496 aa
AA seq
DB search
MSNENTQANSQDENKLITERRAKLAAIRERGNPFPNKFRRTDNSVDLQAAFGDKGKEELE
ELDHQVTVAGRIMAKRGPFMLIQDAVGSIQFYAHKDVQKAIKASDGQWDVGDIVGGTGPI
HKSGKGDLYVNLTEWTLLTKSLRPLPEKYHGLADQETRYRQRYVDLIMNPEVRDTFRLRS
KCISFIRNYLDGKDFMEVETPMLQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLV
VGGFERVYEINRNFRNEGVSTRHNPEFTMLEFYQAYADYHDLMNLTEDMLRKLCQTLMGS
TTVVYQDSEYDFAKPFARMSVFDSILKYNPDLTAADISDLESARAVAKQLKVPLKDSYGL
GKVQIEIFEATVEHLLDQPTFITEYPTEVSPLARRLDDDEFVTERFEFFIGGREVANGFS
ELNDAEDQAERFKAQVAEKDAGDIEAMHYDADYIRALEYGLPPTAGQGIGIDRLVMLFAN
ASTIRDVLLFPHMRPE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaaacacccaagcaaacagtcaagacgaaaacaagctgattaccgagcgc
cgcgctaaactcgccgccattcgcgagcgcggcaatccgtttcctaataagtttcgccgt
accgacaacagtgtcgatttacaggcagcatttggcgacaagggcaaagaagagctagaa
gagctggaccatcaggtcaccgttgccggccgtattatggctaagcgcggcccctttatg
ttgattcaagacgccgtgggttcgattcagttttacgcccataaagacgtacaaaaagct
attaaagccagcgatggccagtgggatgttggcgatattgtcggcggcaccggcccgata
cataaatcgggtaaaggtgatttgtacgtgaatttaaccgagtggacgctactgacgaaa
tcattgcgcccgctgccggaaaaataccacggcttggctgaccaagagacgcgctatcgc
cagcgttacgtggatttaattatgaatcccgaggtgcgcgacaccttccgtttgcgctct
aagtgtattagctttattcgcaactacttagacggcaaagactttatggaagtcgaaacg
ccgatgctgcaagtgatccccggtggggccaccgcacgaccgtttgttactcatcacaat
gcgctggatattgatatgtatctgcgcatcgcccccgagctgtaccttaagcgtttggtg
gtgggcggctttgagcgggtttacgagatcaaccgcaacttccgcaacgaaggtgtctcg
acccggcacaaccccgagttcaccatgctggagttttatcaggcctacgccgattaccat
gacctgatgaacttgacggaagatatgctgcgtaagctgtgccaaaccttaatgggcagc
accaccgttgtataccaagacagcgagtacgattttgccaagccttttgcgcgtatgagc
gtgttcgactcgatcttgaagtacaacccagatttaaccgctgccgatatcagcgacttg
gagtcggctcgcgccgtggctaaacaactcaaggtgccactcaaagacagctatggtttg
ggcaaagtgcaaatcgaaatctttgaagcaaccgtcgagcatctgctggatcagccaacg
tttatcactgagtaccccaccgaggtatcgcccctggcgcggcgcttggacgatgacgag
tttgtcaccgaacggtttgaattttttattggtggccgcgaagttgccaatggctttagc
gagctaaacgatgccgaagaccaagcggagcgcttcaaggcgcaagtggctgaaaaagac
gctggcgacatagaggccatgcactatgatgctgattatattcgcgccttggagtatggc
ttgccgcctaccgcagggcagggtattggtatcgatcgccttgtgatgttgtttgctaac
gcttccactattcgcgatgtgttgttgttcccgcacatgcgtccggagtag
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