KEGG   Gilvimarinus japonicus: R50076_28380
Entry
R50076_28380      CDS       T10758                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
gjp  Gilvimarinus japonicus
Pathway
gjp00740  Riboflavin metabolism
gjp01100  Metabolic pathways
gjp01110  Biosynthesis of secondary metabolites
gjp01240  Biosynthesis of cofactors
gjp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gjp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    R50076_28380 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    R50076_28380 (ribD)
Enzymes [BR:gjp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     R50076_28380 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     R50076_28380 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Bd3614-deam
Other DBs
NCBI-ProteinID: BFM21789
LinkDB
Position
complement(3353081..3354229)
AA seq 382 aa
MTITDRAYMAEALGLARRGLTTTTPNPMVGCLLVRDGEVIGRGWHERAGGPHAEINALRD
AARSAGGDPDSPGAWRDAASGATCYVTLEPCSHTGRTGPCAEALVQAGIARVVYAMEDPN
PEVSGAGFMRLREAGVEVSGPLLEEDALALNAGFVRRMTRGRPWVRCKLAMSLDGRTAMQ
SGESRWVTSRRAREDVQRLRAASCALISGVDTVLMDNASLTVRREDWIEAPSEGELRQPL
RVILDSNQRLKPDCALVKNASPILVVHTGGELRHEWPEHVEHIELPALKGRVRVEAVLDE
LGRRGCNNVLVEAGATLAGSFLRRALLDEIIIYMAPKLMGNNARGLFDLPVDKMSGQLPL
HINDIRAVGQDWRITAVPDMDS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgacaatcaccgatcgcgcctatatggccgaggcgctgggccttgcccgccgtggcctt
accaccacaacccccaaccctatggtcggctgcctgttggtacgcgacggcgaagtgatc
ggccgcggctggcacgagcgcgccggcggcccccacgcagagatcaatgccctgcgcgat
gccgcccgcagcgccggtggtgacccggacagtccaggtgcctggcgcgatgccgccagc
ggcgccacctgctatgtcacccttgagccctgcagccacaccggccgcaccggcccctgt
gccgaggctttggtacaggcaggtattgcgcgggtggtttacgccatggaagaccccaac
cctgaggtttctggcgccggctttatgcgcttgcgcgaggcgggtgttgaggtgtctggc
cccttgctggaagaagacgcgctggcgctaaatgccggttttgtgcgccggatgactcgc
ggtcgcccttgggtgcgctgcaaactggccatgagcctggacggtcgcactgccatgcaa
agcggcgagagccgctgggtaaccagccgccgcgcgcgcgaggacgtacagcgtttgcgc
gctgctagttgcgcgttgatctcaggcgtcgacaccgtgttaatggataacgccagctta
acggtgcggcgcgaagactggatagaagcgcccagcgagggagagttgcgccagccgctg
cgggttattctcgactctaatcagcggttaaagcccgactgcgcgttggtaaagaatgct
tcacctatactggtggtgcacactggcggtgagctgcgccacgagtggccagagcacgtc
gagcatatcgaactacccgcactaaaagggcgggtgcgggtcgaggccgtgttggatgag
ttgggccgtcgtggctgtaataatgtactggtcgaggcgggcgcaaccttggcgggcagt
tttttgcgtcgcgccctgctggatgaaattattatttatatggcgcccaagctgatgggt
aacaatgcccgcggtttgtttgacttgccggtggataaaatgtccggtcagttgccactg
cacattaacgatatccgcgcggtgggccaagattggcgtatcacggccgtaccggatatg
gacagctag

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