Gilvimarinus japonicus: R50076_29720
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Entry
R50076_29720 CDS
T10758
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R50076_29720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gjp03400
]
R50076_29720
Enzymes [BR:
gjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50076_29720
DNA repair and recombination proteins [BR:
gjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R50076_29720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
HypA
ADDB_N
PriA-like_WH
AAA_22
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
BFM21923
LinkDB
All DBs
Position
3522480..3524675
Genome browser
AA seq
731 aa
AA seq
DB search
MMTSAPFVLIALPVPVRTLFHYLAPTPAPIPGARVKVTFGGRSLVGIVIASTDQCDFDAN
KIKPINSVIDHQPLISNHLLEFIRWAADYYQAPLGEALQAALPAPLRQGNPAQHKADSNT
QLWDLTEEGRGLPTGALKRARQQAGIISKLQQTGTSSWAELKAAGCSREALRALNDKKLI
QPATEQNTPTIRQSPLTLNTEQQIAVDAITPNEFGVHLLDGTTGSGKTEVYLQVIARALT
ADPQAQALVLVPEIGLTPQTLARFRRRFGPSVCAVHSGLNDTERLNSWVRAAQGEARVVI
GTRSAIFTPLATPGLIIIDEEHDGSFKQQDGFRYSARDLAVVRAQKLNIPLILGSATPSL
ETLHNAQNGRYQHLHLTLRATANPATPIEVIDSQAATEHHGLTPEALEALARHTNAGNQA
LVFLNRRGFAPILQCRDCGHQLSCPHCDARLTLHRNPYHLHCHHCDYQQAPAKRCESCQS
HRLEPLGAGTERSEEYLSRAFPSTPVIRIDRDSTRNKGALDALIDRVHEGEPCILVGTQM
LAKGHHFPKVTLVVILDVDSGLFSADFRGPERMGQLITQVAGRAGRAEQPGQVLLQSQHG
DHPLLQLLLNQGYGQFAQALLDERELTLMPPLAFLALLRADAPNPGAAMAFLQQARELAE
SIQTDQQIQILGPMPALMEKRGQRFRYLLQFKALSRRTLSVYIRQLIALISAQKASRTTR
WSIDIDPQEMG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttctgcaccgtttgtacttattgcgctccccgtacctgttcgcaccctgttt
cattatctcgcgcccacgcctgcgccaatccccggagcccgagtcaaggtcacctttggc
gggcgctcactggtgggaatcgtcatcgcaagcacagaccaatgcgactttgatgccaat
aaaatcaaacccattaacagcgtcatcgaccaccagccgttaatcagcaaccacttgctc
gaatttattcgctgggccgctgactactatcaagcccctttaggggaagcactgcaagcg
gccctgcccgcaccattgcgccagggcaaccccgcgcaacataaagcagacagcaacacg
caactgtgggaccttaccgaagaagggcgcggcctaccgaccggcgccctcaagcgcgcc
cgccaacaagccggcattattagcaaactacaacaaactggcaccagtagctgggccgaa
cttaaagccgccggctgcagccgagaggcactgcgcgcgttaaacgataaaaaacttatt
caacctgccacggagcaaaacacccccaccatccgacaatcgccgctcaccttaaacacc
gagcaacaaatcgctgtcgacgcaattacccccaatgaattcggcgtacacctacttgac
ggcaccactggcagcggcaaaaccgaggtgtatttgcaagtcatcgcccgcgccctgacc
gccgatccgcaggcgcaagcactggttctagtccccgagatcggcttaacaccacaaacc
ctagcgcgctttcgccgccgttttggccccagtgtctgcgccgtacattcgggcctaaac
gataccgagcgcctcaatagctgggtacgcgccgcccaaggcgaagcgcgagtcgtcatt
ggcactcgctcggctatattcacgccattagccacccccgggctgatcattattgatgaa
gagcacgatggctcattcaaacaacaagacggatttcgttactcggcacgggatctcgcc
gttgtacgcgctcaaaaacttaacatcccgttgattttagggtcggccacaccatcactc
gagacactgcataacgcgcaaaatggacgctaccagcacctccacctgacgctgcgagcg
accgccaacccagccacccccatcgaagtgatcgatagccaagcggccaccgagcaccac
ggcctaacgccagaggccttagaggcactggcgcgacacaccaacgctggtaatcaggct
ctcgtgtttctcaatcgccgaggttttgccccgatattgcaatgtcgcgattgcggccac
cagctaagctgcccgcactgtgatgcgcggcttacgctgcaccgcaacccctatcaccta
cactgccatcactgtgattatcaacaagcgccagccaagcgctgcgagtcttgtcaaagt
caccggctagagcccttaggggccggtaccgagcgcagtgaagagtatttaagccgcgca
tttcccagcacgccagtcattcgtattgaccgagactcaactcgcaacaaaggcgcgcta
gacgccctcatcgacagggttcatgagggcgagccgtgtattttagtgggtacgcaaatg
ctcgccaaagggcaccactttcccaaagtgactctggtcgttattttggatgtggacagc
ggcctttttagcgccgactttcgcggccccgaacgcatgggtcagctaattactcaagtc
gccggtcgcgccggtcgcgccgagcaacccggccaagtattactgcaaagtcagcacggt
gatcacccgttgctgcaactgttacttaaccaaggctacggccaatttgcccaggcgctg
ctcgatgagcgcgagctaaccttaatgccgccgctggcatttctcgcgctgctgcgggcc
gacgcccccaaccccggtgctgccatggcgtttttacagcaagctcgcgagctcgccgag
tcgattcaaaccgatcagcagatacaaatactaggccccatgcccgcgttaatggaaaag
cgcggccagcggtttcgctacttactccagtttaaagcactcagtcgccgcacgcttagc
gtttatatccgtcaactcattgcccttattagcgcgcaaaaagccagccgcaccactcgc
tggtcgatcgatatcgaccctcaagaaatgggctga
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