Gilvimarinus japonicus: R50076_29790
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Entry
R50076_29790 CDS
T10758
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R50076_29790 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gjp02000
]
R50076_29790 (msbA)
Enzymes [BR:
gjp01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
R50076_29790 (msbA)
Transporters [BR:
gjp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
R50076_29790 (msbA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_25
AAA_22
MMR_HSR1
DUF87
AAA_21
nSTAND3
DUF815
NACHT
NB-ARC
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BFM21930
LinkDB
All DBs
Position
complement(3530429..3532201)
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AA seq
590 aa
AA seq
DB search
MNRNNANNPNAASETASLTVYLRLLAYLKPHRMLFGFSVLGFLVYSAAQPAMAQFLDYLL
TFIEAEERGPAWMPSLIILGIIVVRGLGGFVGNYLIAKVSFLVVDTLRVQLFSHMVYLPG
EYFDRNDSGQLMSVITFNVNNVTTASTEALKTLIREGTTVIALLAYLFYKDWALTLLMMT
VVPLIAALVGFVGKRLRRLSTKVQHSMGEITQVSSEMINGYRVMRSFGGEAYEKRRFADA
SWRNYLQNLKIVLTTTLNTPLIQTLVALSMGALLWVALGYIEISDASAFIAYFMAVGMVL
KPMRQLSEIVPVIQKGVAAADSVFQVLDEKTEQDTGSYSVERVSGKVSIRDLSFAYDDDK
PVLKGVSLEVSAGETVALVGRSGSGKSTLVSVLSRFYHQFDGALDIDDVSICDYRLANLR
AQISLVTQNVVLFNDTVANNIAYGALQDIGEEKIRKAAELAYALEFIEQLPDGFNTVIGE
GGTRLSGGQRQRLAIARAILKDAPILLLDEATSALDNESERYIQQALETVSKGRTTFVIA
HRLSTIEQADKIVVMDAGEIVEQGTHHELMALNGHYARLHSASLSDVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaacaacgctaacaaccctaacgccgcttccgagacggcctcactgacggta
tatttaagactgctggcgtaccttaaaccccaccgtatgttgtttggttttagcgtcttg
ggttttttggtgtactcggcggcgcagccggcaatggctcagtttttggattacctgtta
acctttattgaagccgaagagcgcggccccgcatggatgccctcattgattatcttaggc
attattgtggtgcgcggactgggcggttttgtgggtaattaccttatcgccaaggtgtcc
tttctggtggttgataccttgcgggtacagctattcagccatatggtttatttgcccggc
gagtattttgatcgcaacgattcaggccagctgatgtcggtgatcacctttaacgtcaat
aatgttacgaccgcatccaccgaagccttaaaaaccttgatccgggaagggaccacggtc
atagcgttattggcttacttgttttacaaagactgggcgttaacgttgctgatgatgacg
gtggtgccgctgattgcggcattggtcggctttgtgggaaaacgtttgcgtcggctgagt
actaaagtgcagcacagcatgggcgagatcactcaggttagctcggagatgatcaatggt
taccgagtgatgcgcagctttggtggcgaagcgtacgaaaagcgccgctttgccgacgcc
agttggcgcaactacttgcagaatttaaaaattgttttaaccaccaccctgaatacgcct
ttgattcaaaccttagtagcgctatcgatgggggcgcttttgtgggtggcgctgggctat
atcgagatcagtgatgctagcgcgtttatcgcttactttatggcggtgggcatggtgcta
aagcccatgcgccagttaagcgagattgtaccggtgattcaaaaaggtgtggccgccgct
gacagcgtgtttcaggtgctggacgaaaaaaccgagcaggataccggcagctacagcgtc
gagcgcgttagcggtaaggtgtcgattcgcgatctaagttttgcctatgacgacgataag
cccgtgcttaaaggggtgtcgctggaggttagtgccggtgaaacagtggcgttggtgggg
cgctccggtagcggaaaatcgacgttagtgagtgtgttgtcgcgtttttaccatcaattt
gatggcgcgctcgatatcgacgacgtcagtatctgtgactaccgtttggcgaacctgagg
gcccaaatatcactggtgacgcaaaacgtcgtgctgtttaacgatacggtggccaacaat
atagcctacggcgcgttgcaggatattggcgaagaaaagatccgcaaagcggcggagtta
gcttacgcactggagtttattgagcagctacccgacggctttaatactgtcatcggagaa
ggtggtacgcgcctctctggagggcagcgtcagcgcttggcgattgcgcgcgcgatttta
aaagatgcgcccattttgttattggatgaagccacctcggcattggataacgaatcggag
cgatatattcagcaagcgctggaaaccgtctctaaagggcgcacaacttttgttatcgcg
catcggttatcgaccatcgagcaagctgataaaatcgtggttatggacgccggtgagatt
gtcgagcagggcactcatcacgagttaatggcgcttaatggtcactacgcgcgcttgcac
agcgcgtctttgtccgatgtgctgacgctttaa
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