Gilvimarinus japonicus: R50076_30040
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Entry
R50076_30040 CDS
T10758
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
gjp Gilvimarinus japonicus
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gjp03009
]
R50076_30040
Enzymes [BR:
gjp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
R50076_30040
Ribosome biogenesis [BR:
gjp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R50076_30040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Cons_hypoth95
Methyltransf_15
Methyltransf_31
TRM
MTS
UPF0020
TRM5-TYW2_MTfase
FtsJ
Methyltransf_25
PrmA
TruB-C_2
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
BFM21955
LinkDB
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Position
complement(3560765..3561961)
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AA seq
398 aa
AA seq
DB search
MNLPSLYLKPQTDRRLRRGHLWVYSNEVDVKRSPLKVFSPGQQVRLLNNRDELLGVALIN
PASLICARLISRDETLLDARLLQSRFANALSLREQAFSQPYYRLIFGDSDLLPGLVVDRF
GDYLVVQIASAGMEAVRDLVVEQLVALLQPVGVLLANDHSARELEGLTRYTEVAYGTVPD
EVELIENETRFVAPVASGQKTGWFFDHRVGRAQLRQWVKGKRVLDVFSYIGGWGIQAATA
GAERVVCVDASARAIAGVIANAELNGVQDCVSGRQGKAIEVMKALLAEGAKFDVVVLDPP
AFIKRRKDQKAGEAAYRHINELGLKLLADGGLLVSASCSMHLATETLTDIVRASAQKAGR
DARLIHFSGQGPDHPVHSAIAETNYLKAVFARVFNRDH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgccgagcctttaccttaaaccacaaactgaccgacgcctgcgtcgtggccat
ttgtgggtctatagcaacgaggtggatgttaagcgcagtccgctaaaggtgtttagtccc
ggccagcaggtgcggcttcttaataatcgagatgagctgttgggggtggccctgatcaac
cccgccagcttaatttgtgctcggctgattagccgagatgaaacgctactcgatgcccgg
ttgctgcagtcgcgctttgccaatgcactttctttgcgcgagcaggcttttagtcagccc
tattaccgtttaatttttggcgacagtgatttgctgccaggtttggtggtggatcgcttt
ggcgattatctcgtcgtgcaaattgcctcggccggaatggaagccgtgcgggatttagtg
gttgagcagttagtggcgctattgcagcctgtgggtgttttgttggccaacgatcacagc
gcacgcgagctggaagggctgacccgctacaccgaagtggcttatggcacagtgccagat
gaggttgagctgatcgaaaacgaaacgcggtttgtggcaccggtggcatcggggcaaaaa
accggttggtttttcgatcaccgggttggccgggcgcagttgcgccagtgggttaaaggt
aagcgcgttctggatgtgttctcttatattggcggctggggtattcaagcggcgaccgcc
ggtgccgagcgggtagtgtgtgtcgatgcatcggcccgtgcgattgccggtgttatcgcc
aatgccgagctaaacggcgtgcaagattgcgttagcgggcgacagggcaaggcaattgaa
gtgatgaaagcgctgctggccgagggcgcaaaatttgacgtggtggtgctcgatccgccg
gcgtttattaagcgccgcaaagatcaaaaagcgggggaggcggcctatcggcacattaat
gagctgggattaaagttattggctgatggcggtttgctggtgtcggcctcttgttctatg
catttggccaccgagactttgaccgatattgtgcgcgccagcgcgcaaaaagccgggcgc
gatgcgcgtttgattcactttagcgggcaggggccggaccatccggtgcactcggcgatt
gccgagactaactatttaaaagcggtgtttgcccgggtctttaatcgcgatcattaa
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