Gilvimarinus japonicus: R50076_30170
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Entry
R50076_30170 CDS
T10758
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gjp Gilvimarinus japonicus
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gjp03016
]
R50076_30170 (truB)
Enzymes [BR:
gjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R50076_30170 (truB)
Transfer RNA biogenesis [BR:
gjp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R50076_30170 (truB)
Prokaryotic type
R50076_30170 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BFM21968
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All DBs
Position
complement(3578911..3579858)
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AA seq
315 aa
AA seq
DB search
MARRRKGRAVDGVLLLDKPLGVSSNHALQRAKRLFFAAKAGHTGSLDPLATGVLPVCFGE
ATKFSQFLLDADKRYRSTFVLGEKTATGDAEGEVLETLSAAHVTEAEVLKAIQALNGEID
QVPPMYSALKQNGQPLYKLARQGIEVERKARQVTIYEFELLAFRPGERAEIDVDVKCSKG
TYIRSLAEDIGEALECGGHVSALRRTATGPFDESQCVTVDELNAERGDGLSELLDHHLLP
TDTPVAALAALTLPESSAYYFRLGNPVMDAQVYRTGEEGDMVRVFCESGQFLGVATIDEG
RVAPKRLVANPASAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgacgtaaaggccgggccgttgatggcgtattgttgttggataagccttta
ggcgtaagctccaaccatgccctgcagcgcgccaagcgcttgttttttgccgctaaagcc
ggccataccggtagcttagatccgctggcgactggggtgttgccggtgtgttttggcgag
gccaccaaatttagccagtttttgctggatgccgataagcgctaccgttcgacctttgtg
ctgggcgaaaaaaccgccacgggagacgccgagggcgaagtgctagaaaccctcagcgcc
gcgcatgttactgaggccgaggtgcttaaggctatacaggcgctgaatggcgagattgat
caggtcccgccgatgtattcggccctgaagcaaaacggtcaaccgctgtataagttggcg
cgccaaggcatcgaggtcgagcgcaaggctcggcaagtgactatttacgagtttgagcta
ctggcgtttcggcctggcgagcgcgctgagatcgatgtggacgttaagtgcagcaaaggt
acttatattcgctcgctggccgaggatataggcgaggctctcgagtgcggtggccacgtt
agcgccttgcgccgcacggctacagggccgtttgatgagtctcagtgcgttaccgtcgat
gagctgaatgccgagcgcggagacggtttgtccgagctgctggatcaccacttgctcccc
actgacacgcccgttgcagccctggcggcgctgaccttgcccgagtctagcgcctattat
ttccgtttgggaaacccggtaatggatgctcaggtctaccgcacgggcgaagaaggtgat
atggtgcgtgtcttttgtgaaagtggccaatttttaggcgttgccaccattgatgagggc
cgtgtcgcccctaaacgtttagtcgcaaaccccgctagcgcaagctga
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