Geobacillus kaustophilus: GK0004
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Entry
GK0004 CDS
T00217
Symbol
recF
Name
(GenBank) DNA replication and repair protein
KO
K03629
DNA replication and repair protein RecF
Organism
gka
Geobacillus kaustophilus
Pathway
gka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GK0004 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gka03400
]
GK0004 (recF)
DNA repair and recombination proteins [BR:
gka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GK0004 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_27
AAA_21
AAA_29
DUF6753
Motif
Other DBs
NCBI-ProteinID:
BAD74289
UniProt:
Q5L3Y9
LinkDB
All DBs
Position
3180..4298
Genome browser
AA seq
372 aa
AA seq
DB search
MFLTNLTLTNYRNYEYETLNFGEGVNVILGENAQGKTNMMEAIYVLAMAKSHRTSNDKDL
IRWNEEYAKIEGRAEKRSGSLTLELLISKKGKKARCNHIEQQRLSQYVGHLNVVMFAPED
LNLVKGSPQVRRRFVDMEIGQVSPVYIHDLSQYQKLLQQRNHYLKMMQARERSDEAVLDV
LTEQLVLLAAKITLRRRQFLSLLEQWAMPIHYEISRGAEQLCIRYEPSVDVSEKAELSRI
VEAYSETFAAMREREVQRGTTLVGPHRDDIAFFVNGKNVQTFGSQGQQRTTALAVKLAEL
ELIFSELGDYPILLLDDVLSELDDFRQTHLLDAIRKKVQTFVTTTSIDGIKHDIIQEAAI
YRVHSGSVTAPS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttgaccaacttaacgttgacgaattaccggaattatgagtatgaaacgctgaat
tttggtgagggcgtgaacgtcatcttaggagaaaatgcccaaggaaagacgaacatgatg
gaggccatttatgttttggctatggcgaagtcgcaccgcacgtccaacgataaagacctt
atccgttggaatgaagagtatgctaaaatagaaggaagagcggaaaaacgaagcgggtcg
ttaacgcttgagttgcttatttcaaaaaaaggaaaaaaagcaagatgcaaccatattgaa
cagcagcggctcagccaatacgtcggccatttgaatgtcgtcatgtttgctcccgaagac
ttgaatttagtcaagggaagtccgcaagtgcggcgccgatttgtcgatatggaaatcggg
caagtgtcgcctgtgtatatacatgatttgagccaataccaaaagctgctgcaacaacgc
aatcattacttaaaaatgatgcaggcgcgcgagcggagcgatgaggcggttcttgatgtg
ttaactgagcagcttgtattgctggcggccaaaattacgctgcggcgccgccagtttttg
tcgctgcttgagcaatgggcgatgccaatccactatgaaatcagccgcggcgccgaacag
ctttgcatccgatacgaaccgtcggtcgacgtatcagaaaaggcggaattgtcgagaata
gtagaagcatacagtgaaacgttcgccgccatgagggaacgggaagttcagcggggaaca
acgctggtcggcccgcatcgtgatgacatcgcgtttttcgtgaatggaaaaaacgtgcaa
actttcggttcccaggggcaacaacgtacaaccgcgctagcggtcaagctggcagaactt
gagctcatcttttccgagttaggcgattaccccattttattgctggatgatgtgttgtca
gaacttgatgactttcggcaaacccacctccttgatgccatccggaaaaaagtgcaaact
tttgtcacaacaacaagcattgacggcattaagcacgatatcattcaagaagcggctatt
tatcgagtccattctggttcggtaaccgctccttcttga
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