Geobacillus kaustophilus: GK0011
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Entry
GK0011 CDS
T00217
Name
(GenBank) superoxide-inducible protein (protein required for pyridoxine synthesis)
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gka
Geobacillus kaustophilus
Pathway
gka00750
Vitamin B6 metabolism
gka01100
Metabolic pathways
gka01240
Biosynthesis of cofactors
Module
gka_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GK0011
Enzymes [BR:
gka01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GK0011
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Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
IMPDH
IGPS
NMO
TetR_C_27
NanE
FMN_dh
DUF188
DUF2795
Motif
Other DBs
NCBI-ProteinID:
BAD74296
UniProt:
Q5L3Y2
Structure
PDB
PDBj
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All DBs
Position
20029..20913
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AA seq
294 aa
AA seq
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MALTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVAR
MADPTVIEEVMNAVSIPVMAKVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQ
FTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVNMSED
ELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMRGIDIATLLPEHRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggcattgacaggtacggaccgcgtcaaacgcggcatggcggaaatgcaaaaaggcggc
gtcatcatggacgtcgtgaacgcagaacaggcgaaaatcgctgaagcggcaggggctgtc
gcggttatggcgctcgagcgcgtcccggcggacattcgcgccgctggcggtgtcgcgcgc
atggccgacccgacggtgatcgaagaagtgatgaacgccgtttcgatcccagtcatggcg
aaagtgcggatcggtcactatgttgaggcgcgtgtcttagaggcgcttggtgtcgactac
attgacgaaagcgaagtattaacgccggctgatgaggagttccatattgacaaacggcag
tttaccgttccatttgtgtgcggttgccgcgatttaggggaagcggcgcgccgcattgca
gaaggggcatcgatgttgcggacgaaaggagagccggggacaggcaacatcgttgaggcc
gtgcgccatatgcgcaaagtgaacgcgcaaattcgcaaagtcgtcaacatgagcgaagat
gagcttgtcgctgaggcgaaacagctcggggctccggttgaggtgctgcgcgagatcaag
cggcttggccgcctgccggtcgtcaactttgccgccggcggtgtcgcgacaccggctgac
gctgccttgatgatgcacttgggtgcggacggtgtctttgttgggtctggcattttcaaa
tcggaaaatccggaaaaatacgcgcgcgcgatcgtagaggcgacgactcattacgaagac
tatgaattgatcgcacacttgtcgaaaggattgggcggcgcgatgcgcggcatcgatatc
gcgacattgttgccggagcaccggatgcaagaacgcggctggtaa
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