Geobacillus kaustophilus: GK0133
Help
Entry
GK0133 CDS
T00217
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gka
Geobacillus kaustophilus
Pathway
gka03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GK0133 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gka03021
]
GK0133 (rpoA)
03400 DNA repair and recombination proteins [BR:
gka03400
]
GK0133 (rpoA)
Enzymes [BR:
gka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GK0133 (rpoA)
Transcription machinery [BR:
gka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GK0133 (rpoA)
DNA repair and recombination proteins [BR:
gka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GK0133 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAD74418
UniProt:
Q5L3R2
LinkDB
All DBs
Position
141003..141947
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELSEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTAIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGRLRMRMTAKRGRGYVPAEANKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EDDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVK
AKLAELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaaaattgaaacggtcgaactgagcgaagatgccaaatat
ggcaaattcgtcgtcgaaccgcttgagcgtggatatggtacaaccttagggaactccttg
cgtcgtatcctattgtcttcactccctggtgcagctgtaacatcggtgcaaatcgacggc
gtcttgcatgagttttcaacgattgacggcgtcgttgaagatgtgacagccatcattttg
aatatcaaaaaactagcgttgaaaatttattcagacgaagagaaaacgttggagattgat
gtgcagggtgaaggagttgtcacggctgccgatatcactcacgacagcgatgtagaaatt
ttaaacccggaccttcatatcgcgacgctggcggaaggcggccgcctgcgcatgcgcatg
actgccaagcgggggcgcggatatgttcctgctgaggcgaataagcgcgaagaccagccc
atcggcgtcattccgatcgattccatttatacgccggtctcccgagtttcctatcaagtc
gagaatacaagggtcggccaagtgacggactatgacaagctgaccattgatgtgtggacg
gatggaagcattgggccgaaagaggccatttcccttggagcgaaaattttaacggagcac
ttgaacatttttgtcggcttgacggatgaggcgcaaaatgcggagatcatggtcgagaaa
gaggacgatcaaaaagaaaaagtgctcgaaatgacgatcgaggaactcgatctttcggtt
cgttcctacaattgcttgaagcgggccggcatcaacactgttcaagaactgacgcaaaaa
acggaagaagatatgatgaaagtgcgcaacctcggccgcaagtcgcttgaggaagtaaaa
gcgaaactggctgagcttggcctcagcctgcgcaaagacgactaa
DBGET
integrated database retrieval system
