Geobacillus kaustophilus: GK0275
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Entry
GK0275 CDS
T00217
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gka
Geobacillus kaustophilus
Pathway
gka03420
Nucleotide excision repair
gka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GK0275
03430 Mismatch repair
GK0275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gka03400
]
GK0275
Enzymes [BR:
gka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GK0275
DNA repair and recombination proteins [BR:
gka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GK0275
MMR (mismatch excision repair)
Other MMR factors
GK0275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Terminase_6N
SUIM_assoc
Motif
Other DBs
NCBI-ProteinID:
BAD74560
UniProt:
Q5L3C0
LinkDB
All DBs
Position
300373..302547
Genome browser
AA seq
724 aa
AA seq
DB search
MNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNIL
AITFTNKAAREMKERVQALLGGAAEDVWISTFHSMCVRMLRRDIDRIGINRNFSILDPTD
QLSVIKAILKDKNIDPKKFEPRTILATISGAKNDLLTPEQFAKRASTYYEKIVGDVYQEY
QQRLLRNHSLDFDDLIMTTIHLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKLA
DRFQNICAVGDADQSIYRWRGADIRNILSFERDYPNAKVILLEQNYRSTKRILQAANEVI
AHNVNRKPKRLWTENPEGKPIVYYEAMNEVDEAQFVARRIQEAVESGERRYRDFAVLYRT
NAQSRVIEEMFLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR
GIGASTIDKLVRYAAEHELSLFEALGELEMIGFSAKTAGALAAFRGQLEQWTQLQEYVPV
TELVEEVLDQSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLVAFLTDLAL
ISDLDELNGTDQAAEGDAVVFMTLHAAKGLEFPVVFLIGMEEGIFPHLRSLENEDEMEEE
RRLAYVGITRAEEELVLTNAQMRTLFGNIQMNRPSRFLDEIPAHLLETVSRGKPSVSRSA
SARLQAGGAIRVWKVGDRANHRKWGIGTVVSVRGEGDDQELDIAFPSPIGIKRLLAKFAP
IEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttatcggaaaagctgcttgcgcatttaaacaaagagcagcaagaagccgtt
aaaacgacagaaggcccattgctcatcatggcgggagcgggcagcggaaaaacgcgcgtg
ctgacgcaccggatcgcctatttgatggcggaaaaacaggtggcgccgtggaatatttta
gccattacgtttacgaacaaagcggcgcgtgaaatgaaggagcgggtgcaggcgctctta
ggcggggcggcggaagacgtgtggatttcgacgttccattcgatgtgcgtccgcatgttg
cgccgcgacattgaccgcatcggcatcaatcgcaatttttccatccttgacccgacggat
cagctttcggtcatcaaagcgattttgaaagacaaaaatatcgatccgaaaaaatttgag
ccgcggacgattttagcgacgatcagcggggcgaaaaacgatttgctcacgcccgagcaa
ttcgcaaagcgggcatcgacgtactacgaaaagatcgtcggcgacgtgtatcaagagtat
caacagcgccttctccgcaatcattcactcgatttcgacgatttgatcatgacgacgatc
cacttgtttgaccgcgtgccggatgtgcttcaatattaccagtataagttccagtacatc
catatcgatgagtaccaggatacgaaccgcgctcaatatacgctggtgaaaaagctcgca
gaccggtttcaaaatatttgcgccgtcggcgatgccgaccagtcgatttaccggtggcgc
ggggcggacattcgcaatattttatcgtttgagcgcgactacccgaacgcgaaagtcatt
ttgcttgaacaaaactaccgctcgacgaaacgcattttgcaggcggcaaatgaagtcatt
gcgcataacgtcaatcgaaaaccaaagcggttgtggacggaaaacccggaagggaagcca
atcgtctattatgaagcgatgaacgaagtggacgaagcgcaatttgtcgcccgccgcatt
caagaggcggttgagagcggggagcgccgctaccgcgattttgccgtgctttatcggacg
aacgcccagtcgcgcgtcatcgaggaaatgtttttaaaagcgaacattccgtaccaaatc
gtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcttacttgcgc
gtcatcgccaaccccgatgacgatttgagcttgcttcgcatcatcaacgtgccaaagcgt
ggcatcggcgcctctacgatcgacaaacttgtccgctatgcggccgagcatgagctgtcc
ttgtttgaagcgctcggcgagctggagatgatcggcttcagcgcgaagacggccggggcg
ctcgccgcgtttcgcggacagcttgagcaatggacgcagctgcaagaatacgttccggtg
acggaacttgtggaggaagtgctcgaccaatcgggctaccgcgagatgctcaaggcggaa
cggacgattgaagcgcaaagccggcttgagaacttggacgagtttttgtcggtgacgaag
catttcgaaaatgtaagcgacgataaatcgctcgtcgcctttttaaccgacttggcgctc
atttctgatttggacgagctgaatgggacagatcaggcggccgagggcgatgccgtcgtc
ttcatgacgctgcacgccgccaaagggcttgagtttccggtcgtgtttttgattggcatg
gaagaaggcatttttccgcatcttcgttcactggagaatgaggatgaaatggaagaagag
cggcggctggcgtatgtcggcatcactcgggccgaggaagagctcgtattgacgaacgcg
caaatgcggacgctgtttggcaacatccaaatgaaccggccgtcgcgctttttagatgag
attcccgcgcatttgctggagacggtctcgcgtgggaaaccgtctgtttcccgttcagcg
tccgctcgcttgcaggcaggcggcgccatcagggtgtggaaagtcggagaccgggcgaac
catcggaaatggggaatcggtacggttgtcagtgtccgtggcgaaggtgacgaccaagaa
ctcgatatcgccttcccgagcccgatcggcattaaacgtctgctcgctaaatttgcgccg
attgagaaagtatag
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integrated database retrieval system
