Geobacillus kaustophilus: GK0682
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Entry
GK0682 CDS
T00217
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gka
Geobacillus kaustophilus
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gka03400
]
GK0682
Enzymes [BR:
gka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GK0682
DNA repair and recombination proteins [BR:
gka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GK0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
ResIII
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAD74967
UniProt:
Q5L263
LinkDB
All DBs
Position
700495..704223
Genome browser
AA seq
1242 aa
AA seq
DB search
MNATIRPKPAGSRWTDEQWKAIAAGGRDILVAAAAGSGKTAVLVERIIQKVTAEEGAVDI
DRLLVVTFTNAAAAEMKARIGEALERELAKRPHSLHLRRQLSLLPRAAISTLHSFCLDVI
RKYYYLLDLDPSFRIADETEIELLKEDVLEELLEEEYGKPDNERFFAVVDAYTGDRSDAE
LQEMIVALYEFSRSHPEPDEWLAGLTSMYDVDERTDIKTLPAARYIAQHAAMELAAARRL
IRRALELAEEPGGPRPYAERLREDRDMITDLETRLSGPWAELHRALKALSFGRLPACRGK
DYDERLIDEAKSLRDQAKKKVEALRDNVFSLDPSVWLRHMREMKPIVETIANLVRRFAVM
FQAAKREKGIVDFSDLEHYCLHILRRRDPETGEWQPSPAALEYQAQFDEVLVDEYQDTNL
VQEAILQLVKKGSERTGNLFMVGDVKQSIYRFRLAEPMLFLDKYKRFTADGEEGGMKIDL
ASNFRSRREVLDGTNFLFAQLMGETVGEMVYDEAAQLKYGADYPEGEDAAPEVMIINRQR
AAEEDEEEAAEWEAAELEARLMAKKIKEIVSAPFYVYDRSSGQPRRAMYRDIVILVRSMT
NAPQMIEQLQAQGIPAAADLSSGYFQATEISIMLSLLKVIDNPHQDIPLAAVLRSPLFRF
DENELAMIRLADPKGTFYEALCSFRQKPAETKEEANAQRKAAAFLERLEGWRTMARRRSL
ADLIWQLYRDTQFYDFVGALPGGRQRQANLRALYDRARQYESTSFRGLFRFLRFIERLQE
RGDDLGAARPLGEQEDVVRIMTIHSSKGLEFPIVFLAGLARPFHTRDLHHPYLLDKELGF
AARFVHPRLRISYPTLPLLAIQTKKRLELLAEEMRILYVALTRAKEKLYLLASVNDAAKE
IEKWKSAASERGWLLPDDVRASARSYLDWIGRALIRHRDGGALAGTKAPEEVASHPSVWR
VAIVPAADLRGAEAAREEMDGGVLLALEQGRPVPVEGGWQKEVKRRLLWRYSYEKETAVR
AKQSVSELKEQRALFGEQADEWRPRQGTAPVFSRPRFMQEKTLTPAEKGTALHVVMRHLD
LQAPLDESWIRSQIVRLVEKELLSAEQAEAVDPAAIAAFFTADLGRRLCAAREVHREVPF
SLGLKAAELYGGEGTESGRRVLVQGVIDCVFADECGYVMIDYKTDEVVHRFAGQKEEAAR
FLLGRYGTQMRLYRRAIEQIWRAPVAECYLYSFDGGFVVAVE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacgattcgcccgaagccggctgggagccgatggacggatgaacaatggaag
gcgatcgccgcgggcggccgagacattcttgtcgccgcggcggccggatccgggaaaacg
gccgttcttgtcgagcggatcattcaaaaagtgacggcggaagaaggagcggtcgatatc
gatcggctgcttgtcgttacctttaccaatgcggcagccgcggagatgaaagcaagaatc
ggcgaggcgctcgagcgggaattggccaagcgtccgcattcgctccatttgcgacgtcaa
ctcagcctgcttccccgcgccgcgatctcgacgctccattccttttgcttggatgtcatt
cgcaaatattactatttgcttgatttggatccgtcgtttcgcatcgcggatgaaacggaa
atcgagctgttgaaagaggatgtccttgaagagctgcttgaggaggaatatggaaagccg
gacaacgagcggtttttcgctgtcgtggatgcctatacgggcgaccggagcgatgcggag
ctgcaggagatgattgtcgccctttatgaattttcccgctcccatccggaaccagatgaa
tggttggccggtttgacctcgatgtatgatgtcgatgaacgaacagatataaagacgctg
ccagcagcccgctatatcgcgcaacatgctgcgatggagctggcggcggccagacggctg
atccgaagggcgcttgagcttgctgaagagccgggcggaccgcgtccgtacgcggagcgg
ctgcgcgaagatcgagatatgatcactgatttggaaacgcgtctttctggaccgtgggcc
gagctgcatcgcgcgctaaaggcgctgtcgtttgggcggctgccggcctgccgcggcaag
gactatgacgagcggctgatcgacgaagccaaatcgttgcgtgatcaggcgaaaaagaaa
gtggaggcgctgcgcgacaatgtgttttcgctcgatccatccgtttggctccgccatatg
cgggaaatgaagccgatcgttgaaacgatcgctaaccttgtccgccgttttgccgtcatg
ttccaagcggcgaaacgggaaaaaggaatcgttgatttttctgacttggaacattattgt
ttgcatattttgcggcggcgcgatccggaaacgggcgaatggcagccttcccccgccgcc
ttggaataccaggcgcagtttgatgaagtgcttgttgacgagtatcaagatacgaacctc
gttcaagaagcgattttgcagctggtgaaaaaagggagcgaacgaacaggcaatttgttt
atggtcggcgacgtgaaacagtcgatttaccgattccgccttgccgagccgatgctgttt
ctggacaaatacaaacgattcaccgcagacggagaagaaggggggatgaaaatcgatctt
gcgagcaacttccgcagccgccgcgaagtgcttgacgggacgaattttctgtttgcgcaa
ctcatgggggaaaccgtcggcgaaatggtttacgacgaagcggcgcagttgaaatacggc
gctgattacccggaaggggaggatgcggcgccggaagttatgatcatcaaccggcagcgt
gcggcggaagaggacgaagaggaagcggctgaatgggaagcggcggagctcgaggcgcgg
ctgatggcgaaaaaaatcaaagagatcgtttccgctccgttttatgtatacgatcgttcg
agcgggcagccgcggcgcgccatgtaccgtgacatcgtcatccttgtccgctcgatgacg
aatgcgccgcagatgatcgagcagttgcaggcgcaaggcatcccggcggccgcggatttg
tcatccggctattttcaggcgacggaaatttcgatcatgctctcactgttaaaagtgatc
gacaacccgcaccaagacattccgctcgccgcggtgctccggtcgccgctctttcgtttt
gacgagaatgagctcgccatgattcgcctcgccgatccaaagggcacgttttatgaagcg
ctctgttcgtttcggcaaaagccggcggaaacaaaagaggaggccaacgcccaaaggaaa
gcggcggctttcttagagcggctcgagggctggcgtacgatggcgcgccgccgctcatta
gctgatctcatttggcagctgtaccgcgatacgcaattttacgattttgtcggcgcactg
ccgggcggcaggcaacggcaggcgaacttgcgcgctttgtacgaccgcgcgcggcagtac
gagtcgacgtcgtttcgcggcttgtttcgctttcttcgcttcatcgagcggctgcaagag
cgcggcgacgatttaggggcggcccggccgctcggcgagcaggaagacgtcgtgcgcatc
atgacgattcacagcagcaaaggattggaatttccgatcgtgtttctcgctgggctggct
cgtccgtttcatacacgtgatttgcaccacccatatttgctcgataaagagctgggcttt
gccgcccgctttgtccacccgcggctgcgcatcagttatccgacgctgccgctgttggcc
atccaaacgaaaaagcggcttgaactgctcgctgaggagatgcgcattttgtatgtcgcg
ctcacaagggcaaaagagaagctgtatttgttggcgtcggtcaacgatgcggccaaggag
attgaaaaatggaaaagcgctgcttcggaacgcggctggcttctccccgacgatgtgcgg
gcttcggcccgctcctacttggattggatcggccgggcgctcatccgtcatcgggatggg
ggggcgcttgcgggaacgaaggcgcctgaagaggtcgcctctcacccgtctgtatggcgt
gtcgccatcgtgccggccgccgatttgcgcggcgcagaggctgcgagggaggagatggat
ggcggcgtgcttcttgccctcgaacaaggccgacccgttcccgtagaaggagggtggcag
aaggaggtcaaacgccgcttgttgtggcggtattcgtatgagaaagaaacggccgtgcgc
gccaagcaatcggtgtcagaactcaaagaacagcgcgcgctctttggcgagcaagcggac
gaatggcggccgcgccaagggacggctccggtgttttcccggccgcgttttatgcaggag
aaaacgttgacgccggccgaaaaagggacggcgctccatgtcgtcatgcgccatctcgat
ttgcaagcgccgcttgatgaatcgtggatccgcagtcagatcgtccgccttgtcgaaaaa
gagctgctgtcggcagaacaagcagaggcggtcgatccagcggccatcgctgcctttttc
actgcagatcttggccgccgcctttgcgccgcccgcgaagtgcaccgtgaagtgccgttc
agcttggggcttaaagcggctgaactgtacggcggcgaagggacggaaagcggccggcgc
gtcctcgtgcaaggggtgatcgactgcgtgtttgccgacgaatgcggctatgtgatgatt
gactataaaacggatgaagtcgtccaccgttttgctgggcaaaaggaagaagcggctcgt
tttctgctcggccgctacgggacgcaaatgcgcttgtaccggcgggccatcgagcaaatt
tggcgtgcgccggtggcggaatgctatttgtattcgtttgacggcgggtttgttgtggct
gttgagtga
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