Geobacillus kaustophilus: GK1192
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Entry
GK1192 CDS
T00217
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gka
Geobacillus kaustophilus
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GK1192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gka03019
]
GK1192
03009 Ribosome biogenesis [BR:
gka03009
]
GK1192
03036 Chromosome and associated proteins [BR:
gka03036
]
GK1192
Enzymes [BR:
gka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GK1192
Messenger RNA biogenesis [BR:
gka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GK1192
Ribosome biogenesis [BR:
gka03009
]
Eukaryotic type
90S particles
RNase
GK1192
Prokaryotic type
rRNA processing factors
GK1192
Chromosome and associated proteins [BR:
gka03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GK1192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Phage_P2_GpU
NTP_transf_4
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
BAD75477
UniProt:
Q5L0Q3
LinkDB
All DBs
Position
1211574..1212314
Genome browser
AA seq
246 aa
AA seq
DB search
MSKQKDKERIHEKRRAKFQELQNKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLE
FLGDAVLELTVSQYLFQKFPHMSEGQLTKLRAAIVCEPSLVKFANALSFGELVLLGKGEE
LTGGRTRPALLADVFEAFIGALYLDQGMDAVIRFLEKTMFPKIDEGAFSHVMDFKSQLQE
LVQRDGSGTLEYAILEEKGPAHNKEFVARVALNGQELGIGVGRSKKEAEQHAAQMALETL
RAADQQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaaaagataaagagcgcatccatgaaaagaggcgggcgaagtttcaagag
ctgcaaaacaaaatcggcatcacctttcgaaacgaaaagctgttgattcaagcgttcacc
cattcatcgtatgtgaatgagcatcggcggcggcttcacgaagacaatgaacggcttgag
tttttaggcgatgccgtgctggagctgaccgtttctcaatatttatttcaaaagttcccg
catatgagcgaggggcaattgacgaagctgagggcggccatcgtctgcgagccgtcgctt
gtgaaatttgccaacgccctgtcgttcggcgagctcgtcttgctcggcaaaggcgaggag
ctgaccggcgggcggacgcgtccggcgctcttggcagacgtctttgaggcgttcatcggc
gctttgtatttggatcaaggaatggacgcggtcatccgctttttggagaaaacgatgttt
ccgaaaattgatgaaggtgctttttctcatgtgatggattttaaaagccagctgcaggaa
ttggtgcagcgggacggcagcggaacgcttgaatacgctattttggaggaaaaaggtccg
gcccacaacaaggagtttgtcgcccgcgtagcgttaaacggccaagagcttggcatcggc
gtcggccgctcgaaaaaggaagccgaacaacatgcggcgcaaatggcgctcgaaacgttg
cgggctgccgatcagcagtga
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integrated database retrieval system
