Geobacillus kaustophilus: GK2482
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Entry
GK2482 CDS
T00217
Symbol
sigA
Name
(GenBank) DNA-directed RNA polymerase major sigma-43 factor (sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
gka
Geobacillus kaustophilus
Pathway
gka02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GK2482 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gka03021
]
GK2482 (sigA)
Transcription machinery [BR:
gka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GK2482 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_20
DUF2408
DUF2316
Motif
Other DBs
NCBI-ProteinID:
BAD76767
UniProt:
Q5KX19
LinkDB
All DBs
Position
complement(2502241..2503368)
Genome browser
AA seq
375 aa
AA seq
DB search
MAEKPAQSKQAEAAGESLEQVKEQLAELGKKRGILTYEEIAERLSGFDLDSDQMDEYYEY
LAEQGIEVISESDLEADPDIDDLAKEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVPLLS
AEEEIELAKRIEQGDEEAKRRLTEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PTPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagcccaatcaaagcaggctgaagctgccggcgaatcgcttgaacaa
gtgaaagagcaactcgctgagctcggcaaaaagcgggggatcctcacctatgaggaaatc
gctgagcggttgtctggctttgatttggactccgaccagatggatgagtattatgaatac
ctcgctgagcagggcattgaagtgatcagcgaatccgaccttgaggccgatccggacatc
gacgacttggccaaagaggaagaattcgacttaaatgacttgtccgttcctcccggcgtc
aaaatcaatgacccggtgcgcatgtacttgaaggagatcggccgcgtgccgctgttgtcg
gcggaagaagaaatcgagctggcgaaacggatcgagcaaggcgatgaagaagcgaaacgc
cggctgacggaagcgaacctccgcctcgtcgtcagcatcgccaaacggtatgtcggccgc
ggcatgctctttcttgatttgattcaagaagggaacatggggctgatcaaggcggtcgaa
aagtttgactatcggaaaggctacaagttcagcacgtacgcgacctggtggatccgccaa
gccatcacaagggcgatcgccgatcaggcgcggacgatccgcatcccggttcatatggtc
gaaacgatcaataaactgatccgcgtccaacggcaattgctccaagacctcgggcgcgaa
ccaacgccggaagaaatcgccgaggaaatggatttgacaccggaaaaagtgcgggaaatt
ttgaaaatcgctcaagaaccggtgtcgctcgagacgccgatcggcgaggaagatgactcg
catcttggcgatttcatcgaagaccaagacgcgacatcgccatccgagcacgctgcttac
gagctgttgaaagagcagctcgaagatgtgcttgatacgctgacggatcgcgaggaaaat
gtgttgcgtctccgcttcgggcttgacgacggacggacgcggacgctcgaagaagtcggc
aaagtgttcggcgtgacgcgcgaacgcatccgtcaaattgaagccaaagcgttgcgcaag
ctgcgccatccaagccgcagcaaacggctgaaagactttttagagtga
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