KEGG   Geobacillus kaustophilus: GK3086
Entry
GK3086            CDS       T00217                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
gka  Geobacillus kaustophilus
Pathway
gka03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GK3086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gka03400]
    GK3086
DNA repair and recombination proteins [BR:gka03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GK3086
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GK3086
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_22 UFL1 AAA_19 Flavi_DEAD AAA_30 AAA_7 AAA_16 AAA_25 TrwB_AAD_bind UB2H AAA
Other DBs
NCBI-ProteinID: BAD77371
UniProt: Q5KVB5
LinkDB
Position
complement(3106842..3108818)
AA seq 658 aa
MEGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPT
LVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ
YDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREH
VAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQV
LVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSPGVVEQIIRPTGLLDP
TIDVRPTKGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADTITKSMEVAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDVIRATY
AAEETEMYEAKPAAAMTKQEREELIRTLEAEMKEAAKALDFERAAQLRDIIFELKAEG
NT seq 1977 nt   +upstreamnt  +downstreamnt
gtggagggccgttttcaattagtggcgccatacgaaccgcaaggcgatcagccgcaggcg
atcgccaagctcgttgacggcctgcgccgcggggtgaagcatcaaacgctacttggggcg
acggggacgggcaaaacgtttacgatctcgaacgtgatcgcccaagtcaacaaaccgacg
cttgtcatcgcccacaacaaaacgctcgctggccaattgtacagcgagctgaaagagttt
ttcccgcacaacgccgtcgaatattttgtcagctattacgattactatcagccggaagcg
tatgtgccgcagacggatacgtacattgaaaaagacgcgaaaatcaacgatgaaatcgac
aaattgcggcactcggcgacatcagccttgtttgagcgccgggacgtgattatcgttgcg
agcgtgtcgtgcatttacggtttagggtcgccggaagagtaccgcgaactggtcgtatcg
ctgcgcgttgggatggagatcgagcgcaacgcgttgcttcggcggcttgtcgacatccaa
tacgaccgcaatgacatcgattttcgccgcggcacgttccgcgtccgcggcgatgttgtc
gaaattttccccgcgtcgcgcgatgaacattgcatccgcgtcgaatttttcggcgatgaa
atcgagcgcatccgcgaggtggacgccttaaccggcgaggtgctcggcgagcgcgagcat
gtcgccattttcccggcgtcgcacttcgtgacgcgcgaggagaaaatgcggctcgccatt
caaaacatcgaacaagagcttgaggagcggcttgccgaactgcgcgcgcaagggaagctc
ttagaggcgcagcggcttgagcagcggacgcgctatgaccttgaaatgatgcgcgagatg
ggcttttgttccggcatcgaaaactactcgcgccatttggcgctgcggccgccgggctca
acgccgtatacattgcttgactattttccggacgattttttgatcatcgttgatgagtcg
cacgtcaccttgccgcagctgcgcggcatgtacaacggcgaccgggcgcgcaagcaagtg
cttgtcgaccacggcttccgtctgccgtcggcgcttgacaaccggccgctcacgtttgaa
gagttcgagcaaaaaatcaatcaaattatttacgtctcagcgacgccggggccgtatgag
cttgaacacagcccgggcgttgtcgaacaaatcatccgcccgaccgggcttctcgaccca
acgatcgacgtccgcccgacgaaagggcaaatcgacgatttgatcggcgaaattcgcgag
cgcgtcgagcggaacgagcggacgttggtgacgacgctgacgaaaaagatggcggaagat
ttgaccgattatttgaaagaagcggggatcaaggtggcgtatttgcattcggaaattaag
acgctcgagcgcattgaaatcatccgcgatttgcggctcggcaaatacgatgtactggtc
ggcatcaacttgcttcgcgaagggctcgacattccggaagtgtcgcttgtcgccattttg
gatgccgacaaagaagggtttttgcgctcggagcgctcgctcatccagacgatcggccgg
gcggcgcgcaacgcgaacggccatgtgatcatgtacgccgatacgatcacgaaatcgatg
gaagtcgccattcaagagacgaagcggcgccgcgcgattcaagaagagtacaaccgaaag
cacggcatcgtgccgcgcacggtgaaaaaggagattcgcgacgtcatccgcgcgacgtat
gcggcggaagagacggagatgtacgaggcaaagccggcggcagcgatgacgaaacaagag
cgggaagagctgattcgaacgctcgaagcggaaatgaaagaggcggccaaagcgctcgac
ttcgagcgggccgcccagctgcgcgatatcattttcgaattgaaagcggaagggtga

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