Geobacillus kaustophilus: GK3424
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Entry
GK3424 CDS
T00217
Name
(GenBank) DNA-directed RNA polymerase sigma-37 factor (sigma-B)
KO
K03090
RNA polymerase sigma-B factor
Organism
gka
Geobacillus kaustophilus
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gka03021
]
GK3424
Transcription machinery [BR:
gka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GK3424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_23
HTH_38
Sigma70_r4_2
KORA
HTH_28
HTH_Tnp_ISL3
HTH_10
HTH_24
HTH_3
HTH_50
HTH_Crp_2
HTH_31
Trp_repressor
CT_C_D
Sigma70_ECF
HTH_Tnp_4
HTH_11
GerE
MarR
GntR
Motif
Other DBs
NCBI-ProteinID:
BAD77709
UniProt:
Q5KUC7
LinkDB
All DBs
Position
3462964..3463734
Genome browser
AA seq
256 aa
AA seq
DB search
MTVYPPPLSKSKLDALISAYQQTKTEEAATALLVRFEPLIAAAAKKMARSRPDFYEDLFQ
IGRLSFLRLLDHYDPSQGASFESYAMKSLIGYMKNYLRDKAWYIQVPRKVKEKGSKVQQA
IDELTVKLERSPNIDEIAAHLGLSVEETIEILAGRDHYQAISLDAPVQDGEKDATTIGEF
VADEANEIESLIERMDLEQAIGKLSEQEQIVIDAVFRRGETQRSLAERLGVSQMTISRIQ
KRAIAKLKRQLAAYSP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatatccccctcctctgtccaagagcaagcttgacgccctcatttccgcctat
caacaaacaaaaacggaagaagcggcgaccgccttgctcgtgcgcttcgagccgctcatt
gcggccgcagcgaaaaaaatggcgcgcagccgccctgacttttacgaagacttgtttcag
atcggacggctgtcgtttttgcgcctcctcgatcattatgacccgagccaaggtgcaagc
tttgagtcatacgccatgaaaagcttgatcggctatatgaaaaactatttgcgcgacaaa
gcatggtacatccaagtaccgcgcaaggtgaaagaaaaaggaagcaaagtgcagcaggcg
atcgatgagctgaccgtcaagctcgagcggtcgccgaacatagatgaaattgccgcccat
ttaggcttatcggtggaagagacgatcgagattttagccggccgcgaccattaccaggcg
atttcgctcgacgccccggtgcaagacggggaaaaggatgcgacgacgatcggtgaattc
gtcgcggatgaagcgaacgaaatcgagtcgctgatcgagcgaatggatttagagcaggcg
atcggcaaactgagcgagcaagaacaaatcgtcatcgacgccgtcttccgccgcggcgag
acgcaacggtcgctcgctgaacggcttggcgtctcgcaaatgacgatcagccgcattcaa
aagcgggccatcgcgaaattgaagcggcagctcgccgcctattcgccataa
DBGET
integrated database retrieval system
