Geobacillus kaustophilus: GK3494
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Entry
GK3494 CDS
T00217
Symbol
thdF
Name
(GenBank) thiophen/furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
gka
Geobacillus kaustophilus
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gka03016
]
GK3494 (thdF)
Transfer RNA biogenesis [BR:
gka03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
GK3494 (thdF)
Prokaryotic type
Methyltransferases
GK3494 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
GTP_EFTU
MMR_HSR1_Xtn
ABC_ATPase
AAA_16
AAA_29
AAA_15
AAA_28
ABC_tran
Roc
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAD77779
UniProt:
Q5KU57
LinkDB
All DBs
Position
complement(3540583..3541971)
Genome browser
AA seq
462 aa
AA seq
DB search
MTEFDTIAAISTPMGEGAIAIVRLSGDQAVEIADRLFRSPSGKRLKDVPSHTIHYGHIID
PKSGRVVEEVMVSVMRAPKTFTREDVVEINCHGGFVSVNRVLQLVLANGARLAEPGEFTK
RAFLNGRIDLSQAEAVIDLIRAKTDRAMNVALQQMEGRLSKLIRELRQTILETLAHVEVN
IDYPEYDDVEEMTPRLLREKAEYVRGQIEKLLSTAAQGKILREGLATVIIGRPNVGKSSL
LNALAHENRAIVTDIPGTTRDVIEEYVNVRGVPLRLIDTAGIRETEDVVERIGVERSQQM
LKRADLILLVLNYHEPLTEEDERLFAMIEGMDAIVIVNKTDLPRRIDMERVKELAAGRPV
VGTSLLHEQGIDELEKAIADLFFGGELEAGDLTYVSNSRHIALLEQAKTAIEDALAGIDA
GMPVDLVQIDLRRAWELLGEIIGDTVHESLIDQLFAQFCLGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgacggaatttgatacgatcgccgccatttcgacgccgatgggcgaaggggcgattgcc
atcgttcggttgagcggagatcaagcggttgagatcgctgaccggcttttccgcagcccg
agcggaaagcggctcaaagacgttccatcacacacgatccactacgggcatatcatcgat
ccgaaaagcggacgggtcgttgaagaagtaatggtatcagttatgcgcgcaccgaagacg
tttacgcgcgaggacgtggtcgagatcaactgccatggcgggtttgtttccgtcaatcgg
gtgctgcagctcgtgctggcaaacggggcgcggctcgccgagccgggggagtttacgaag
cgggcgtttttaaatgggcgcatcgatttatctcaagctgaggcagtcatcgacctgatc
cgcgccaaaaccgaccgagcgatgaacgtcgccctacagcaaatggaagggcgcctgtca
aaattgattcgcgagttgcggcagacgattttggagacgctggcacatgttgaagtcaat
atcgattatccggaatacgatgatgtcgaagaaatgacgccgcgccttttgcgggaaaag
gcggaatatgtgcgcgggcaaattgaaaagctgctgtcgaccgccgcgcaaggaaaaata
ttgcgcgaagggctggcaacggtcatcatcgggcggccgaacgtcggcaaatcgtcgctt
ttgaatgcgctcgcccatgaaaatcgggcgatcgtcaccgatattccggggacgacgcgc
gacgtcatcgaggaatatgtcaacgtccggggcgtaccgcttcgcttgatcgatacggct
ggcatccgcgaaaccgaagatgtcgtcgaacggatcggcgtcgagcgctcgcagcaaatg
ttgaagcgggccgacttaattttgctcgttttgaattatcatgaaccgctgacggaagag
gacgagcggctgtttgccatgatcgagggaatggacgccatcgtcattgtgaataaaacc
gatttgccccggcggatcgatatggagcgggtcaaggagctggcggccggccggccggtc
gtggggacatccctgttgcatgaacaaggaattgatgaactggagaaggcgattgctgac
ctgttttttgggggtgagctggaagccggcgatttgacgtacgtttcaaactctcgccat
atcgccttgctcgagcaggcgaaaacagcgatcgaggatgccttggccggcattgacgcc
ggcatgccggttgatctcgtccaaatcgatttgcgccgggcatgggagttgcttggcgaa
atcattggtgatacggtccatgaaagcttgattgatcagctgtttgctcagttttgttta
ggaaaataa
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