Grimontia kaedaensis: K6Q96_00075
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Entry
K6Q96_00075 CDS
T09175
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd00071
Fatty acid degradation
gkd00280
Valine, leucine and isoleucine degradation
gkd00310
Lysine degradation
gkd00362
Benzoate degradation
gkd00380
Tryptophan metabolism
gkd00410
beta-Alanine metabolism
gkd00640
Propanoate metabolism
gkd00650
Butanoate metabolism
gkd00907
Pinene, camphor and geraniol degradation
gkd00930
Caprolactam degradation
gkd01100
Metabolic pathways
gkd01110
Biosynthesis of secondary metabolites
gkd01120
Microbial metabolism in diverse environments
gkd01200
Carbon metabolism
gkd01212
Fatty acid metabolism
Module
gkd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K6Q96_00075 (fadB)
00650 Butanoate metabolism
K6Q96_00075 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K6Q96_00075 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K6Q96_00075 (fadB)
00310 Lysine degradation
K6Q96_00075 (fadB)
00380 Tryptophan metabolism
K6Q96_00075 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K6Q96_00075 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K6Q96_00075 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K6Q96_00075 (fadB)
00930 Caprolactam degradation
K6Q96_00075 (fadB)
Enzymes [BR:
gkd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K6Q96_00075 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K6Q96_00075 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K6Q96_00075 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K6Q96_00075 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
USH02495
UniProt:
A0ABY4WT80
LinkDB
All DBs
Position
I:complement(16993..19158)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYQGDTLSVRYLEDGLAELNLDAPGSVNKFDLATLESLNEALNALSQKSDVKALLLTSA
KPAFVVGADITEFLGLFAKPEEELSNWVTHANDIFNKLEDLPFPTVSVISGFALGGGCEC
ILATDFRIADSTARIGLPETKLGIMPGFGGTVRMPRLVGADTAMELITAGKESKADAALK
IGLVDAVTAPDDLRDAAIALAKQAIEGKLDWQSRRAQKKAPLQLNKIEATMSFTMAKGMV
ARVAGPHYPAPMTAVVAIEEASRSDRDGALVVENKHFVKLAKNDVTQALVGIFLNDQYLK
SKAKKAAKEGKPTERGAVLGAGIMGGGIAYQSASKGVPVLMKDISQASLETGMKEASKLL
NKQLERGRLNGLKMAEVLASITPSLHYAGIEQSDVVVEAVVENPKVKAAVLSEVEALLPE
GAVLTSNTSTIPIDLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGKDTSEETVARVVAY
AAKMGKSPVVVNDCPGFFVNRVLFPYFAGFSMLLRDGADFTKVDKVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPERMAKSYRDAVDVMFESERFGQKNGIGFYKYSVDRKGKP
KKDVDADVAGLLSSVLGSATDYSDEEIINRMMVPMINEVVRCLEEGIIATPQEADMALVY
GLGFPPFRGGVFRYLDTIGLANYVAMADQLANLGPAYEVPQGLRDKAAKGEGYFDAQRQS
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtgacaccctgtccgtgcgctatctagaagatggcctcgcggagctg
aacctcgatgcacccggctctgttaataaattcgaccttgcaacactggaaagtctcaac
gaggcgcttaatgctctctcgcaaaagtccgacgtaaaagccctgctgctgacgtctgcc
aaaccagcgtttgtcgtaggcgcagatatcactgaattccttggcctgtttgccaagcca
gaggaagagctctcaaattgggtcacgcacgcgaacgatatcttcaacaaactcgaagat
ctgcctttccctaccgtttccgtcatttccggtttcgcgctaggtggtggctgcgagtgc
attcttgctactgatttccgtattgctgattccaccgcgcgcatcggcctgccagaaacc
aaacttggcatcatgccgggctttggcggcaccgtgcgaatgcctcgtctggtgggtgct
gataccgcgatggagctcatcaccgctggtaaagaaagcaaagccgatgccgcactcaaa
atcggtctggttgatgccgtgacggcaccggatgacctgcgtgatgctgcgattgccctt
gctaagcaagccattgaaggcaagttggattggcaatcacgtcgcgcacagaaaaaagcg
ccactgcaactgaacaagatagaagccaccatgagcttcaccatggccaaaggcatggtg
gcgcgtgtggcaggtcctcactacccagctcctatgactgcagttgtggcgattgaagaa
gcgtcacgctccgatcgcgacggtgccttggtggttgagaacaaacacttcgtcaaattg
gcgaagaacgatgtcactcaggcactggttggtattttcctcaatgatcagtacctaaaa
tccaaagccaaaaaagccgccaaagaaggtaagccaactgagcgtggtgctgtactgggt
gcaggcatcatgggtggcggtatcgcttaccagtcagccagcaaaggtgtaccggtactg
atgaaagacatcagtcaggcttcgctagaaactggcatgaaagaagcgtccaaactgctg
aacaagcaattggagcgtggtcgtcttaacggtttgaaaatggcagaagtacttgcctct
atcaccccgagcctacactacgcaggtatcgagcaatctgatgtggttgttgaagccgtg
gtagagaacccgaaagtaaaagctgcagtactgagcgaagtggaagccttgctgccagaa
ggtgctgtactgacttccaacacctccacgattcctatcgatctgttggcaaaatcgctc
aagcgaccagaaaacttctgcggcatgcacttctttaacccagtgcaccgcatgccactg
gtagaagtcattcgcggtaaagatacctcagaagaaacagtggcacgcgtggtggcgtat
gccgccaagatgggtaaaagcccagtggtcgtcaacgactgtccagggttcttcgtaaac
cgcgtgctgttcccctactttgctggtttcagcatgctgcttcgtgacggcgctgacttc
accaaagtcgacaaagtgatggagaaaaaattcggctggccaatgggccctgcttaccta
cttgatgtcgtaggtattgatactgcgcaccatgcacaggctgtgatggcagaaggcttc
ccagaacgtatggcgaaaagctaccgcgatgctgtcgatgtgatgtttgagtccgagcgc
tttggtcagaagaatggcatcggtttctacaaatactcggtcgaccgcaaaggcaaaccg
aagaaagacgtggatgctgatgttgcaggcctgctgtcatcagtactcggttcggcgacc
gattacagcgacgaagagatcatcaaccgcatgatggtgccgatgatcaacgaagtagtg
cgttgtctggaagaaggtattatcgcgactcctcaggaagcagacatggcgctggtttac
ggccttggcttccctccattccgaggcggtgtattccgttatctggataccattggactg
gcaaactatgttgctatggctgaccaactggccaacctgggccctgcctatgaagtgccg
caaggtcttcgcgacaaagctgccaaaggcgaagggtatttcgatgcccaacgacagtct
gcctaa
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