Grimontia kaedaensis: K6Q96_00415
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Entry
K6Q96_00415 CDS
T09175
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gkd03021
]
K6Q96_00415 (rpoH)
Transcription machinery [BR:
gkd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6Q96_00415 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
SWC7
Motif
Other DBs
NCBI-ProteinID:
USH02546
LinkDB
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Position
I:85244..86107
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AA seq
287 aa
AA seq
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MTTEMYALAPISQDSLDSYLQQVNGYPMLSADEERELAERLHYEEDLDAAKGLILSHLRF
VVHIARGYSGYGLPVSDLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKSKKRLGWFNAEEVNMVADQLGVDAAEVREMESRLAAQDA
GFDAGADDDEREGGAVAPVFYLEDKSSDVATNLESQNWEDHANRRLAQAMSGLDERSQHI
IRSRWLDDDNKATLQELADHYQVSAERIRQLEKNAMRKLKEAVGDAL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagagatgtatgcactggcccccatctcccaagatagccttgatagctatctg
cagcaggtaaatggctatccaatgctgtctgcggacgaggagcgtgagctggcagaacgt
cttcactatgaggaagatctggatgcggctaaaggcctgatcctgtctcacctgcgtttt
gttgttcatatcgcccgtggttattccggttatggattgccagtgtctgatttggtgcag
gaaggtaacattggtttgatgaaggccgtgaagcgctttaacccggaagtgggtgtgcgt
ctggtttccttcgctgttcactggatcaaagcagaaattcatgagtacgtcctgcgtaac
tggcgtatcgtgaaagtcgcgaccaccaaggcgcaacgtaagttgttcttcaacctgcgt
aagtcgaagaagcgtctgggttggttcaacgccgaagaagtgaacatggttgctgaccaa
ctgggcgttgatgcggcagaagtgcgtgagatggaatcacgtcttgcggcgcaggatgct
gggtttgatgctggcgcagatgatgatgagcgtgaaggcggtgcagttgctcccgtcttc
tatctggaagataaaagctccgatgtcgccaccaacctggaatcacaaaactgggaagac
cacgcgaatcgtcgcctggcacaagccatgtccggactcgacgagcgcagccagcacatt
atccgttcacgctggctggacgatgacaacaaagccactttgcaggaactggctgatcac
tatcaggtgtctgcagagcgtatccgtcaacttgaaaagaacgcaatgcgcaaactgaaa
gaagccgttggcgacgctttgtga
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