Grimontia kaedaensis: K6Q96_00650
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Entry
K6Q96_00650 CDS
T09175
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6Q96_00650 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_00650 (mutM)
Enzymes [BR:
gkd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K6Q96_00650 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K6Q96_00650 (mutM)
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6Q96_00650 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF8259
Zn_ribbon_LysW
DZR
Lar_restr_allev
Zn_ribbon_IS1595
Zn_ribbon_8
Zn_ribbon_6
NFACT_N
DNA_ligase_ZBD
Auto_anti-p27
RNHCP
DUF7575
Motif
Other DBs
NCBI-ProteinID:
USH02592
UniProt:
A0ABY4WU00
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All DBs
Position
I:128533..129342
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVEVSRMGIQPHATDQVVTKLEVRQPKLRWPVPDTLFDIEGQTIRAVKRRAKYLI
LETDIGYALVHLGMSGSLRVLSQATAPDKHDHVDLHLSNGKVIRYNDPRRFGAWLWQEKG
GDHPALEKLGPEPLTDAFTGEYLFEKAQGKRTAIKQFIMDNAVVVGVGNIYANESLFTSR
INPQRPAGQLNLDEANTLVADIKDVLATAIKQGGTTLKDFTQADGKPGYFAQELLVYGRQ
GKPCPECGTELESVKIGQRNTVFCPECQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccggaagttgaagtgagccgtatgggtattcagccccatgcgacggat
caggtcgtcaccaaactggaagtcagacagcccaaactacgttggcctgttccggacacc
ttatttgatatcgaaggccagacaattcgtgcagtgaaacgccgcgcaaagtacttgata
ctggagacggatattggctatgcgctggtgcatttaggaatgtcaggcagtttacgtgta
ctgtcgcaggcgacagcgcctgataagcacgatcatgtcgatttacacctctccaatgga
aaagtgattcgctacaacgatccacgccgatttggcgcctggctttggcaggaaaagggc
ggtgatcaccctgctttggaaaaactcggtcccgagccactcactgacgcgtttaccggt
gagtatctgtttgaaaaggcgcaggggaaacgtacggcgattaagcaatttattatggat
aacgccgtcgttgtcggggtggggaacatctacgccaatgaatccctgttcacctctaga
atcaacccacagcgtccagcgggacagcttaatcttgatgaagctaatacactggtggct
gatatcaaagatgttttggcaaccgccatcaagcaaggtggcacgacgctgaaagatttc
actcaagctgatggcaagcctggctactttgcgcaagagttgttggtgtatggcaggcaa
ggtaagccgtgcccagagtgtggcactgagcttgagagcgtgaagattgggcagcgaaat
acggtgttttgtcccgagtgccaaaaataa
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