Grimontia kaedaensis: K6Q96_02975
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Entry
K6Q96_02975 CDS
T09175
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_02975 (sbcD)
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6Q96_02975 (sbcD)
Archaeal homologous recombinant proteins
K6Q96_02975 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
PRORP
Motif
Other DBs
NCBI-ProteinID:
USH03004
UniProt:
A0ABY4WW00
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All DBs
Position
I:602622..603857
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AA seq
411 aa
AA seq
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MKILHTSDWHLGQNFFTKSRKQEHQAFLDWLLQEIDKNQIDAVIVAGDVFDTGSPPSYAR
EMYNQFVVSISQRNCALVVLGGNHDSVSTLRESKSLLACLHTHVVANTSDDLQSQLIALK
NHDGEIGAIVCAVPFVRPRDVLTSQAGESGTDKRQALGDAIKSHYHELYQAAVKLRDDNG
WQVPIIATGHLTALGVSPSKSVRDIYIGTLDGFAADGFPPADYIALGHIHRPQIVAKSEH
IRYSGSPIPLSFDELKFNKQVVLVEFDGDQRARIEPISVPSFQPMGVLKGSLEEIEVQLS
EYLEHDDPKAVWLHIEVSVQDYLSDLQQRIQLMTEGLNVEVLQLQRTRGPKAQALTQEAK
ETLSELTPNDVFQKRLALEVFEGEDELARKERIQTQFTKIVAEVEHAEGEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactccacacgtcagactggcatttaggacaaaactttttcaccaaaagccgc
aagcaggaacaccaggcttttctggactggcttttacaggaaatagataaaaatcagatt
gatgccgtcatcgtggctggagatgttttcgacacaggttcgccgccaagttacgcccgt
gagatgtataaccagtttgtggtttccatcagtcagcgcaactgtgcgttggtggtactg
ggcggtaaccatgactcggtttccacgctcagagaatccaaatccctgctggcttgcctg
catacccatgtggtggcaaacaccagcgacgatctgcaaagccaactcatcgcgttgaaa
aaccacgatggcgaaatcggtgcgattgtgtgtgcggtgcctttcgtgcgcccgcgcgat
gtgttgaccagtcaagctggtgaatctggcactgacaagcgtcaggcacttggtgatgcc
attaaatcccactaccacgagctgtatcaggcagcagtgaagttgcgcgatgataacggc
tggcaagtgcctatcattgcgacgggccatctaaccgcacttggcgtgagcccatctaaa
tctgtgcgtgatatctacattggtacgctcgatggctttgcggcagatggctttccgcct
gctgactacattgccctggggcatatccaccgcccacagattgtcgccaagtcagagcat
atccgatacagcggctctccgatccctttgagctttgatgaactcaaattcaacaagcag
gtggtgctggtggaattcgacggcgaccagcgcgcgcgtatcgagccgatcagcgttccg
agctttcagcctatgggtgtcctaaaagggtcactggaagagatagaagtacagctttca
gagtatttggaacatgatgatccaaaagctgtctggctgcacatcgaggtctctgtgcag
gactatctctctgatttacaacaacgtattcaactgatgactgaagggctcaatgtagag
gtattacagcttcagcgcacccgtgggccaaaagctcaggcgctgacacaagaggcgaaa
gaaaccttgtctgagctgacaccgaatgatgttttccaaaagcgattggctctcgaggtg
tttgaaggggaggacgaacttgcgcgtaaagaacgtatccaaacccagttcaccaaaatt
gtggcggaagttgagcatgcggagggtgaagaatga
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