Grimontia kaedaensis: K6Q96_05620
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Entry
K6Q96_05620 CDS
T09175
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6Q96_05620 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_05620 (ruvB)
Enzymes [BR:
gkd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6Q96_05620 (ruvB)
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6Q96_05620 (ruvB)
RecFOR pathway proteins
K6Q96_05620 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
AAA_14
nSTAND3
RNA_helicase
AAA_2
AAA_PrkA
TIP49
NTPase_1
Rad17
AAA_18
NB-ARC
Bac_DnaA
TniB
ABC_tran
AAA_17
AAA_24
NPHP3_N
AAA_28
Sigma54_activ_2
bpMoxR
TsaE
Motif
Other DBs
NCBI-ProteinID:
USH03480
LinkDB
All DBs
Position
I:1178294..1179301
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AA seq
335 aa
AA seq
DB search
MIEADRLMGTVPPSREDDVIDRAIRPKMLSDYQGQDHVRDQMEIFIHAARKREEALDHLL
IFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLAALLTNLEPNDVLFIDEIHRLS
PVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGITQ
RLEYYNIADLKGIVKRSANCLNLDMDEEGAFEIARRARGTPRIANRLLRRVRDYAEVKAD
GRINADVASKALDMLDVDNQGFDYMDRKLLTAIIEKFDGGPVGLDNLAAAIGEAKDTIED
VLEPYLIQQGYLQRTPRGRIASQRAYLHFGFDMPE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgatcgactgatgggcacggtacccccgagccgcgaagacgacgtcatt
gaccgcgctattcgcccaaagatgctgtcggattatcaaggtcaggatcatgtccgtgat
cagatggaaatctttattcatgcggcgcgtaaacgtgaagaagccctcgaccatttgctg
atctttgggcctccaggtctgggtaaaaccactttggcaaatattgttgccaacgagatg
gaagtgaatatccgcacaacctccgggcctgtgctggaaaaagccggtgacttggcggcg
ctgctgaccaatcttgaaccaaacgatgtgcttttcattgatgaaattcaccgcttgagc
cctgtcgtggaagaagtgttgtatccagcgatggaagactaccaactggatatcatgatt
ggtgaaggcccggctgcgcgttctattaagatcgacttgccaccatttacgctagtaggc
gcaacgacacgtgctggctcattgacctctccactgcgtgatcgtttcggcatcactcag
cgccttgagtactacaatattgctgacctcaaaggcattgttaaacgcagcgcgaattgc
ctgaatctggatatggatgaagagggggcgtttgaaatcgctcgtcgtgctcgtgggaca
ccacgtatcgcgaaccgtctgcttcgccgggtccgtgactatgcggaagtcaaagctgat
ggtcgtatcaatgcggatgtggcatcaaaagccttggatatgctagatgttgacaatcag
ggcttcgactatatggaccgcaaacttctcacggcgattatcgagaaatttgatggtggt
ccggttggtttggataacctcgccgcggcaattggtgaagccaaagacaccattgaagat
gttcttgagccttatcttatccaacaaggttacctgcagcgtactccacgaggtcgtata
gcaagtcagcgtgcttatcttcattttggatttgatatgcctgagtga
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