Grimontia kaedaensis: K6Q96_09235
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Entry
K6Q96_09235 CDS
T09175
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_09235
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
K6Q96_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DZR
zf-tcix
SLFN-g3_helicase
DUF7577
T1R_D3-like
ERCC3_RAD25_C
AAA_22
AAA
AAA_30
Zn_Ribbon_1
MgtE_N
Motif
Other DBs
NCBI-ProteinID:
USH01122
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All DBs
Position
I:1999825..2001600
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AA seq
591 aa
AA seq
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MYTLRPYQSDAVKAVVHYFRNNTTPAVAVLPTGAGKSLVIAELAKLARGRVLVLAHVKEL
VEQNHEKYEGYGLKGGIFSAGLGRKESGDKVVFASVQSVVRNLDAFKDQFSLLVIDECHR
VPDNEDSSYRKVISHLQTVNPGIKVLGLTATPYRLGMGWIYQYHTAGRVRSEKPRFFRDC
IFELPIRFLLDEGFLTEAKILDAPVLSYDFSSLKASPTGFYKEADLDRVIENAPRATPQI
INQVLDYAKERHGVMLFAATVKHAQEILTLLPENESALVIGDTAQDERDNIIQRFKKREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIAGRGLRLSPGKTDCLILDYAGNVY
DLYQPEIGDPKPDSDSEIVTVPCPACGFNNNFWGKLDNNGFLIEHYGRRCQGFFEDDEGE
REICGYRFRAKFCSECGADNDIAARRCHQCDHALVDPDKKLRDALKLKDAMIMACADMRL
TAGKNKFDKPHLKVTYVGQDGAEIHEIWPLSTKRQKDEFLAKFINPHLVDRHRPFTDTAP
SKVARAEHRLRFPDFIVARKNGRFWAIRDKIFDLNQFASQQEVRTMFKSVA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtatacccttcgcccctatcagtctgacgctgttaaagcagtcgtccactattttcga
aacaacaccaccccagccgttgcggtgctgcctactggtgcaggaaaaagtctggttatc
gcagaactggcgaagttggcacgtggtcgtgttttggtacttgcccatgtaaaggagctt
gttgagcaaaaccacgaaaagtatgaagggtatggactgaaaggtgggattttctctgcg
ggtctcggcagaaaagaaagtggcgataaagtcgtgtttgcttctgtgcaatccgtggtg
cgaaatctcgatgctttcaaagaccagttttctttattggttattgatgaatgccaccgc
gtaccagataacgaagacagcagttatcgcaaagttatttctcaccttcaaaccgttaac
cctggcatcaaggtattagggctgacagccaccccctatcgactcggtatgggttggatt
tatcagtatcacaccgctggccgggttcgcagcgaaaaacccagattcttccgtgattgt
atcttcgagcttcctatccgattcttgttggatgaaggctttttaacggaagcaaagata
ctcgatgcacctgtcttgagctacgatttttcatcactcaaagcgtcaccaaccggattc
tataaagaagcggatttggaccgcgtgatagaaaacgcaccaagggcaacgccccaaatc
attaaccaagtcctcgattatgccaaagagcgacatggtgtgatgctctttgccgccaca
gtaaaacacgctcaagaaattctcaccctactgcctgagaacgaatcggcacttgtcatc
ggtgatacggcgcaagatgaacgtgacaacataattcagcgcttcaaaaagcgggaaatt
aagtatctggtcaacgtttcagtgctaacaaccggctttgatgcgccacatgtcgatctc
atcgccatcttgcgtccgacagaatccgtcagcctgtatcagcaaattgcaggacgtgga
ttacggctctctcccggtaagaccgactgtttgattctggattatgcaggcaatgtctac
gacctataccaacctgaaattggtgatcccaagccggatagcgacagcgaaatcgtgact
gttccctgcccggcctgtggctttaacaacaatttctggggcaagttggataacaacggt
tttctgattgaacactatggtcgtcgttgtcagggctttttcgaagacgatgagggcgaa
agggaaatctgtggttaccgtttccgtgccaagttctgcagcgaatgtggcgcagacaat
gacattgcagcgagacgctgtcatcagtgtgatcacgcattggtcgatcctgacaaaaag
ctgagagatgccttaaagctcaaagatgccatgatcatggcctgcgctgacatgcgatta
acggcaggtaaaaacaaattcgacaaaccacatttaaaagtcacttatgtcgggcaggat
ggcgcggaaattcatgaaatctggcccctttcgaccaaacgccaaaaggatgaatttctc
gctaaatttatcaatccacatttggttgaccgacacaggccttttacagacacagcgcct
tctaaagtcgcgcgtgcagaacacaggctgaggtttcctgactttattgtggcaagaaag
aacgggcggttttgggcaattagggataaaatcttcgacctgaatcagtttgcctcgcag
caagaagtcaggaccatgttcaaaagcgtagcgtga
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