Grimontia kaedaensis: K6Q96_09935
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Entry
K6Q96_09935 CDS
T09175
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6Q96_09935 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gkd02000
]
K6Q96_09935 (msbA)
Enzymes [BR:
gkd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
K6Q96_09935 (msbA)
Transporters [BR:
gkd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K6Q96_09935 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
AAA_30
nSTAND3
AAA_29
SLFN-g3_helicase
AAA_24
DEAD
ABC_membrane_2
DUF5906
AAA_25
MMR_HSR1
AAA_18
G-alpha
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
USH01247
LinkDB
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Position
I:complement(2206758..2208515)
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AA seq
585 aa
AA seq
DB search
MSSNYQDKTTWETFKQLWPYIANYKAGLVVAIIALIVNAAGDTLMVSMLKPLLDEGFTYD
AVESDFLKWMPLYLVGLMLIRGVSSFVSAYCISWVSGKVVMTMRRRMFNHFMKMPVSFFD
KESSGALLSRITYDSEQVANATSGALVSLVREGASIIGLMILMFYNSWQLSAILLVIAPI
VAIAIRIVSKRFRKISSNMQEAMGSVTSSAEQMLKGHKVVLSFGGQEVEKARFEDVSNRM
RQQTMKLVSAQAIANPVIQLIASFALVAVLVLANTDAIRSELSAGTFAVVFAAMFGLMRP
LKALTNVTSQFQRGMAACNSLFELMELETEKDNGQHVAERVKGDVKVNDVVFTYPTKDAP
ALDRVTFDLPAGQTLALVGRSGSGKSTIANLLTRFYDIDSGDITIDGVKIEDYTLSNLRD
HVAIVSQNVHLFNDTIANNIAYAAENEYTREEIERAADLAYASDFIRDMDSGFDTIIGEN
GVSLSGGQRQRIAIARALLRNAPVLILDEATSALDTESERAIQAALDELQKDRTVLVIAH
RLSTIENADQILVVDEGEIVERGTHADLLAKDGAYAQLHRIQFGE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaactaccaagacaaaacgacctgggaaacctttaagcagctgtggccatac
atcgctaactacaaagcgggcttggtggtagccattatcgcgctgattgttaatgctgct
ggtgacacccttatggtttctatgcttaagcctctgcttgatgaaggttttacttacgac
gctgtcgaaagcgatttcctgaaatggatgccgctttatctcgttggcttaatgttgatt
cgaggtgtgtcgagtttcgtttctgcgtactgtatctcctgggtatcaggtaaagtcgtg
atgacgatgcgtcgccgcatgtttaaccatttcatgaagatgccagtcagtttttttgat
aaagaatcttccggtgcgcttctttcccgtattacctacgactcagaacaggttgccaac
gcgaccagtggtgctttggtcagcctagtccgtgaaggtgcgtcaatcattggtctgatg
attctgatgttctataacagctggcagctctctgcgattcttttggtgatcgcgccaatt
gttgctattgcgattcgtatcgtttccaagcgttttcgtaaaatctcttccaacatgcag
gaagccatgggttcggttacctcatctgcagagcaaatgctgaaaggccacaaagtggta
ttgagcttcggtggtcaggaagttgaaaaggcgcgttttgaagacgtatctaaccgcatg
cgtcagcaaaccatgaaactggtatctgctcaggcgatcgctaacccagtgattcagtta
attgcgtcttttgctctggtcgctgtgcttgttttggcaaacacagatgctatccgcagt
gagttgagcgctggtacttttgctgtcgtatttgctgccatgttcggcttgatgcgtcct
ctgaaagcattaactaacgtgacctcacaattccagcgcggtatggctgcgtgtaatagc
ttgttcgagctgatggaactggaaacagagaaagacaacggccaacacgttgctgagcgc
gtaaaaggtgatgttaaggtcaacgatgttgtcttcacttacccaaccaaagatgcgcca
gcgcttgaccgcgttaccttcgatttgcctgcagggcagacgttggcactggtgggccgc
tctggttctggtaagagtaccattgctaacctgttgacccgtttctatgacatcgacagc
ggtgatatcaccattgatggcgtaaaaatcgaagattacaccctaagtaatctgcgtgat
cacgttgccatcgtttctcagaatgttcacctgtttaacgataccatcgccaacaacatt
gcttacgcggctgagaacgaatacacccgcgaagagattgagcgagcagcagatttggct
tatgcctccgactttatccgcgatatggatagtggtttcgacacaatcattggtgagaac
ggtgtgagcctttctggtggtcagcgccaacgtatcgctattgcccgcgctttgctgcgt
aatgcgccagtgctgattctcgatgaggcaacttctgcgttggatacagagtcagagcgt
gctattcaggcagcgttggatgagctacaaaaagaccgcactgtgctggtgattgcgcac
cgactgtcgaccattgaaaacgctgatcaaattctggttgtcgatgaaggtgagattgtt
gagcgtggcactcacgccgacttgctagccaaagatggtgcatacgcacagcttcatcgt
atccagtttggagaataa
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