Grimontia kaedaensis: K6Q96_11890
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Entry
K6Q96_11890 CDS
T09175
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
gkd
Grimontia kaedaensis
Pathway
gkd02020
Two-component system
gkd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6Q96_11890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6Q96_11890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gkd02022
]
K6Q96_11890
Two-component system [BR:
gkd02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
K6Q96_11890
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_19
HTH_23
HTH_29
AAA_16
HTH_30
HTH_7
Motif
Other DBs
NCBI-ProteinID:
USH01591
UniProt:
A0ABY4WPS9
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All DBs
Position
I:complement(2626924..2628375)
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AA seq
483 aa
AA seq
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MLDSGAKKRILMVEDTASVAALYKSYLNPLDVEVEIASTGQEAIHHFSSGNFALVLLDLR
LPDISGFDVLSEIRELHPDIPVVIMTAHGSIDAAVEAMRYGASDFLIKPCEADLLRVTVN
NALKPKSKIGGQSPEGAYYGFIGHSVPMQAVYRVIDSAAPSKATVFITGESGTGKEVCAE
AVHAASSRAKKPFVAINCAAIPKDLIESELFGHMKGAFTGAASEREGAAEMADGGTLFLD
EICEMDLDLQSKLLRFIQTGTFQKVGSSKVKQVDVRFVCATNRDPWEEVMKGNFREDLYY
RLHVIPLTLPPLRERGEDVVEIAQSLLLMFAMEEGKDFRTFNAEVTGRLLSYEWPGNVRQ
LQNVIRNIVVLHNAREVTEQMLPPPLNTVSGVKIASTPVRATTQTAIAPSRDDDLSVASA
LLNQGAVTKADIEPLWLVEKRAIQIAIDACDGNIPQAAGLLEVSPSTIYRKLQSWQESQE
KRN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctagattctggcgccaaaaaacgcatcttaatggtggaagacaccgcttctgtggct
gcactgtacaagtcttatctcaatccactggatgtcgaggttgagatagcaagtacgggt
caggaagcgattcaccatttttcttcaggtaattttgcgttggtccttttggatctgcga
ctgcctgacatttccggtttcgatgtgctttctgaaattcgcgaacttcacccggatatt
cccgttgtgatcatgactgcgcatggctcaattgatgcggctgtggaagcaatgcgctac
ggcgcaagcgactttctgattaagccttgcgaagctgatttgttacgggtaactgtcaat
aacgcgctgaaaccaaaaagtaaaattggtggccagtctcctgaaggagcgtattacggc
ttcatcgggcacagtgtgccaatgcaggctgtttaccgtgttattgactccgctgcgcct
agtaaggcgacagtgttcattactggcgaaagcggcacgggtaaagaagtgtgtgcggaa
gcagttcatgccgcaagctcacgcgccaaaaagccgtttgtcgcgattaactgtgctgct
atcccgaaagatcttattgagagtgagctatttggccacatgaaaggcgcctttactggc
gcagcgtccgaacgagaaggcgcagcagaaatggctgatggaggtacgctgttcctggat
gaaatctgtgaaatggatcttgatctacagtctaaactcctgcgattcattcaaacgggc
acattccagaaagtggggtcttccaaagtaaaacaagtcgatgtgcggtttgtttgtgcg
acgaaccgtgatccttgggaagaggtgatgaaaggcaacttccgcgaagatctttactat
cgcctgcatgtcatccctttgacgcttccgccgctgcgcgagcgtggtgaggatgtcgtc
gagattgctcagtccctgctgcttatgtttgctatggaggaaggaaaagattttcggacc
ttcaacgcagaagttactggccgcttgttaagctacgaatggccagggaatgtgaggcaa
ttacagaatgtgatccgcaacattgttgtgctacacaatgcgcgagaagtcacagaacaa
atgctgcctccgccattaaatacagtttctggtgtcaaaattgcatctactcccgttaga
gcaactacgcaaacagcaattgctccttcgcgcgacgacgatttgtcagtcgcatcagcg
ttgttgaatcaaggggcggtgacgaaagccgatattgaacccttgtggttggtagaaaag
cgagcgatacaaattgcaattgatgcatgtgatggaaacatccctcaggcggcaggcctg
ttagaagtgagcccatcaactatttatcgcaagctgcaaagttggcaagaatcacaagaa
aaaaggaactaa
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