Grimontia kaedaensis: K6Q96_13460
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Entry
K6Q96_13460 CDS
T09175
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K6Q96_13460 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_13460 (xseA)
Enzymes [BR:
gkd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K6Q96_13460 (xseA)
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K6Q96_13460 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF3114
CCDC93_CC
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
USH01867
UniProt:
A0ABY4WWG6
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All DBs
Position
I:2972276..2973604
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AA seq
442 aa
AA seq
DB search
MNLTNNNIYTVSRLNAEVRLLLENEMGIVWLVGEISNLTMATSGHWYFTLKDRQAQVKCA
MFKGNNRRVTFKPANGNQVLVRARLSLYEPRGDYQIIVESMQPEGDGLLQQQFEKLKMQL
SAEGLFAASLKKTLPEQPKRVGVITSSTGAALHDILHVLKRRDPSLPVVIYPTQVQGKDA
AIQIAQTIGRANSRNECDVLIIGRGGGSLEDLWCFNEEIVARTIAASSIPIVSAVGHEVD
VTIADFVADVRAPTPSAAAELVSRDTSVRDQQLLQRTDRLAHAFSRHLSRSQEWLTRLQH
RLAMQHPKAQLQQQSQQFDELERRLHQSMRYTLQTEAQRLDRASQKLERYSPANQIPGQK
AQLGYVEQRLIEAMRRQLRQHQHALALQMETLDAVSPLATLARGYSITRNDKGEVIRSAS
SLKSGDQIRSTFGDGEIQSTVN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaccaacaacaatatctataccgtctccagattaaacgctgaagtgcgtttg
ctgctcgaaaacgaaatggggattgtttggctggttggcgagatttcaaatctcaccatg
gcaacatctggtcactggtatttcaccctgaaagaccgtcaggctcaggtgaaatgcgcc
atgttcaaaggcaataaccgacgtgtgacttttaaaccagccaacggtaatcaggtgttg
gtgcgtgcaaggctttctctgtatgagccccgcggtgactaccaaatcattgtcgaaagc
atgcagcctgaaggtgacggcctgcttcaacagcaatttgaaaaattgaaaatgcagctt
tctgcagaaggtctgtttgctgccagtctgaaaaaaacactcccagaacaacccaagcgg
gttggcgtgatcacttccagcactggcgcggcgctgcatgatattttgcatgtcctgaaa
cgccgcgatcccagcttgcctgtggtgatttatcccacccaagttcagggcaaagatgct
gcgattcaaatcgcacagactattgggcgtgccaacagccgtaatgaatgtgatgtgctg
atcatcggtcgtggcggtggttcgttagaagacttatggtgcttcaacgaagaaattgtt
gcccgtaccattgccgccagctccatcccgatcgtcagtgcagttggccatgaagttgat
gttaccatcgcggatttcgtagctgatgtccgcgcccctaccccgtcagctgcagcagag
cttgtcagccgtgatacctctgtacgtgatcaacaactcttgcagcgtactgatcgccta
gcacacgcattcagccgtcatttgagccgctctcaggaatggctgactcgcttgcaacat
cgattggcgatgcaacaccccaaagcgcagcttcagcaacaatcacagcagtttgatgag
cttgaaaggcgtcttcaccaatccatgcgctatacactccaaacggaagcgcagcgcctg
gatagagcttcgcaaaagcttgagcgttactcacccgcgaaccaaattccaggccagaaa
gcacaactaggctatgtggagcagcgtcttatcgaggccatgcgccgccaactccgacaa
catcagcatgcactggcactgcagatggaaacattggatgcggtgagcccgctggcaaca
cttgcacgcggttattcaatcacccggaacgataaaggcgaagtcattcgttcagcatcg
tcgcttaagtctggcgatcagatcaggtcaacatttggagatggagagattcaatctacc
gtgaactag
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