Grimontia kaedaensis: K6Q96_13965
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Entry
K6Q96_13965 CDS
T09175
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6Q96_13965 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gkd03019
]
K6Q96_13965 (pnp)
03016 Transfer RNA biogenesis [BR:
gkd03016
]
K6Q96_13965 (pnp)
Enzymes [BR:
gkd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K6Q96_13965 (pnp)
Messenger RNA biogenesis [BR:
gkd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K6Q96_13965 (pnp)
Transfer RNA biogenesis [BR:
gkd03016
]
Prokaryotic type
tRNA degradation factors
K6Q96_13965 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
aRib
S1_2
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
USH01961
UniProt:
A0ABY4WQW4
LinkDB
All DBs
Position
I:complement(3100262..3102391)
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AA seq
709 aa
AA seq
DB search
MNPIVKTFQYGNHTVTLETGVMARQATAAVMVSMDDTSVFVSVVGKKEAVEGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDNFKNEVQVIATVVSVN
PNVSPDIVTMIGTSAALAISGIPFNGPIGAARVGFINDELVLNPSNTELENSRLDLVVAG
TEGAVLMVESEADRLSEEQMLQAVVFGHDQQQVVIQAINEFAAEVATPAWDWTAPEVNTE
LKARVAELAEAQFTEAYQITEKMARYDRVGEIKSSVKEQLLEQDETLDAREIQGMLYSLE
KNVVRSRIIAGEPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQRD
AQIIDSITGETTDNFLFHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIQSVMPSQEEF
PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKKSVAGIAMGLVKEGEDFVVLSDI
LGDEDHLGDMDFKVAGTDDGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQAI
SSARDDISEFAPRIHTIKINPEKIKDVIGKGGAVIRALTEETETTIEIEDDGTVKIAATD
GEKAKAAIARIEALTAEVEVGRIYTGKVTRIVDFGCFVSVIGTKEGLVHISQVADKRIEK
VSDYVEMGQEVQVKVLEIDRQGRIRLSMKEAVEQAPEASETDAQPEADA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaatcgtaaaaacgttccagtacggtaaccacaccgtgactttggaaactggc
gtaatggctcgccaggctactgctgcagttatggttagcatggacgatacttcagtattc
gtttctgttgttggtaaaaaagaagcggttgaaggtcaagacttcttccctctgactgtt
aactaccaagagcgtacttacgcggcaggtaaaatcccaggtggtttcttcaagcgtgaa
ggtcgcccttctgaaggcgaaaccctgactgcgcgtctgatcgaccgtccaatccgtccg
ctgttccctgacaactttaaaaacgaagtgcaggttatcgcgactgtggtttctgtaaac
ccgaacgttagcccagacatcgtgaccatgattggtacttctgcggcgctggcgatttct
ggcatcccattcaacggcccaatcggtgctgcacgcgttggtttcatcaacgatgagttg
gtactgaacccaagcaacacagagcttgagaacagccgtctggatctggttgttgctggt
actgaaggcgcagttctgatggttgaatcagaagctgaccgtctgtctgaagagcaaatg
ctgcaagcggtggtgttcggtcacgatcaacagcaagtggttattcaggctatcaacgag
ttcgcagcagaagttgctactccagcttgggattggactgcaccagaagtgaacaccgag
ctgaaagcgcgtgttgctgaactggctgaagcacaattcaccgaagcgtaccaaatcact
gagaaaatggcgcgttacgaccgtgttggcgaaatcaagtcaagcgtgaaagagcaactg
cttgagcaagacgagacgctggacgcacgtgaaatccaaggcatgctgtacagccttgag
aagaacgtagtacgtagccgtatcattgctggtgaaccacgtatcgacggtcgtgagaaa
gacatggttcgtgcactggacgttcgtactggcgttctgccacgtacccacggttcttca
ctgttcacccgtggtgaaactcaggcgctggtaacggcaactctgggtactcagcgtgat
gcgcaaatcatcgactcaatcactggtgaaacaacggataacttcctgttccactacaac
ttccctccgtactgtgtaggtgagaccggctttgttggctctcctaagcgtcgtgaaatc
ggccacggtaaactggcgaagcgtggtatccagtcagtgatgccatctcaggaagaattc
ccatacacggttcgcgtagtatctgaaatcactgaatctaacggttcttcttcaatggcg
tctgtttgtggttcatcgctggcgctgatggacgcaggtgtaccaatcaagaaatctgtt
gcgggtatcgcgatgggtcttgtgaaagaaggcgaggattttgttgttctgtctgacatc
ctgggtgacgaagaccacctgggcgacatggacttcaaagtagcaggtactgacgacggt
gtgactgcactgcagatggacatcaagatcgaaggtatcaccaaagagattatgcagatc
gctctgaaccaagcaaaaggtgcgcgtctgcacatcttgagcgtgatggatcaggctatc
tcttctgcacgtgacgatatctctgaattcgcaccacgtatccataccatcaagatcaac
ccagagaagatcaaagatgtcatcggtaaaggcggtgcggttatccgtgcgctgactgaa
gaaactgaaaccactatcgaaatcgaagacgacggtactgtgaagatcgcagcaaccgac
ggcgagaaagcgaaagcggctatcgcgcgcatcgaagcgctgactgcagaagtggaagta
ggtcgtatctacacaggtaaagtcactcgtatcgtagacttcggttgcttcgtgtctgtt
atcggcaccaaagaaggcttggtacacatttctcaagtggctgataagcgcatcgagaaa
gtgtctgactacgttgaaatgggtcaggaagtacaggttaaggttctggaaatcgaccgt
cagggtcgtatccgtctgtcaatgaaagaagcggtagagcaagcgccggaagcttcagaa
actgacgcacagccagaagctgacgcataa
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