Grimontia kaedaensis: K6Q96_13990
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Entry
K6Q96_13990 CDS
T09175
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gkd03021
]
K6Q96_13990 (nusA)
03009 Ribosome biogenesis [BR:
gkd03009
]
K6Q96_13990 (nusA)
Transcription machinery [BR:
gkd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
K6Q96_13990 (nusA)
Ribosome biogenesis [BR:
gkd03009
]
Prokaryotic type
rRNA transcription factors
K6Q96_13990 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
DUF2187
KH_KhpA-B
Glyoxalase_4
Prot_ATP_ID_OB_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
USH01966
LinkDB
All DBs
Position
I:complement(3107342..3108829)
Genome browser
AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKAVPRERIFEALETALATATKKKYEADIDVRVAIDRKTGEFDTFR
RWLVVEEVALPTREITLEAAQFEDETLDLGGFVEDEIESVTFDRITTQTAKQVIVQKVRE
AERAQVVEQFMDNEGELITGVVKKVNRDVIIVDLGNNAEAAIQRDDQLPRENFRPGDRVR
GLLYAVRPEARGFQLFMTRSKPEMLIELFRIEVPEIGEEMIEVMGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASIIVDE
DTHAMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVEDLQKKHQEEAGQSIELFS
KHLDIDEDFAAVLVEEGFTTLEEVAYVPAAELLEINGLDEDTVDELRNRAKEALTTIALA
KEEILDGAEPAEDLLGLEGLDREMAFRLASKGVCTLEDLADQGTDDLLDIEGMDEVKAGE
LIMAARNICWFSDEA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaatcttggctgtcgtagaagcggtatccaacgaaaaagcggttccacgt
gagcgcatttttgaagcactggaaacggcgctggctacagctacaaagaaaaaatacgaa
gccgacatcgatgtacgtgttgctatcgatcgtaaaactggtgagtttgacaccttccgc
cgctggttggtggtagaagaagtggcgttgccaacgcgtgaaatcacgttggaagcggcg
caatttgaagatgaaacactggatctgggtggtttcgttgaagacgaaatcgaatcagtg
acgtttgaccgcatcacgacccaaactgctaagcaagtgatcgtgcagaaagtacgtgaa
gcagagcgtgcccaagtggttgagcagttcatggataacgaaggtgagctgatcactggt
gtggtcaagaaagtaaatcgcgatgtgattatcgtcgatctgggtaacaacgcagaagcg
gcaatccagcgtgacgatcaactgccacgtgaaaacttccgtccaggcgaccgcgttcgt
ggtttgctgtatgctgtacgcccagaagcgcgcggtttccagctattcatgacccgctct
aagccagaaatgctgatcgaactgttccgtattgaagtgccagaaatcggcgaagaaatg
atcgaagtgatgggcgcggctcgtgatccaggctctcgtgcaaaaatcgcggtgaagacc
aacgacaaacgtattgacccagtcggtgcgtgtgtgggcatgcgcggtgcgcgtgttcag
gctgtttctggtgagctgggtggtgagcgtatcgatatcgttctgtgggacgataaccca
gcgcaattcgttattaacgcgatggcaccagctgatgttgcttctatcatcgttgacgaa
gacactcacgcgatggacatcgccgttgaagctgacaacctggcgcaggctatcggccgt
aacggtcaaaacgttcgtctggcttctcagctgactggctgggaactgaatgtaatgacc
gttgaagatcttcagaagaagcatcaggaagaagctggtcagtctatcgaactgttcagc
aagcacctggatatcgacgaagacttcgcagcagtgctggtcgaagaaggtttcacaacg
ttagaagaagtggcatacgtaccagcagcagagcttctggaaatcaatggactggatgaa
gacaccgttgatgaattgcgtaaccgcgcgaaagaagcactgaccactattgcgttggca
aaagaagaaatccttgatggtgcagagccagcagaagacttgcttggtctggaaggtttg
gatcgtgaaatggcgttccgcctggcgtcgaaaggcgtttgcactctggaagatctggct
gaccaaggcacagatgatcttctggatatcgagggaatggatgaagttaaagcgggcgag
ctgattatggctgcgcgcaatatttgctggttcagcgacgaagcttaa
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