Grimontia kaedaensis: K6Q96_14155
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Entry
K6Q96_14155 CDS
T09175
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6Q96_14155 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gkd03019
]
K6Q96_14155 (rppH)
Messenger RNA biogenesis [BR:
gkd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K6Q96_14155 (rppH)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
USH01997
UniProt:
A0ABY4WQY7
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Position
I:complement(3143857..3144381)
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AA seq
174 aa
AA seq
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MIDGDGYRPNVGIVICNSHGQVLWARRYGQHSWQFPQGGIDDGETPEQAMYRELYEEVGL
TKKDVRILATSRHWLRYKLPKRLVRWDSKPVCVGQKQKWFLLKLECDESKVNMQRGGTPE
FDGWRWVSYWYPVRQVVSFKREVYRRAMKEFAPMAMPFRERKNKRKGKRGTAKN
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggctaccgtcccaacgtagggatagtaatttgtaacagccacggt
caagttctctgggctcgtcgatacggacaacactcttggcaatttccacaaggtggtatt
gatgacggtgaaactcctgaacaggccatgtaccgtgaactctacgaagaggtagggtta
acaaagaaagacgtaagaattctggctaccagtcgtcactggctacgctataaattacct
aaacgtctggtacgctgggattccaagccagtgtgtgtcggccagaagcaaaaatggttt
ttgctgaagctggagtgtgacgagtcaaaggtgaacatgcaacgcgggggaacgccggaa
tttgatggctggcgctgggtcagctattggtaccccgtaaggcaagtggtgtcgtttaaa
cgcgaagtttatcgacgtgcgatgaaagagtttgcgcctatggcgatgccttttcgcgaa
agaaaaaacaaacggaaaggcaagcggggcacagcgaagaactaa
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