Grimontia kaedaensis: K6Q96_15915
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Entry
K6Q96_15915 CDS
T09175
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gkd03000
]
K6Q96_15915
Transcription factors [BR:
gkd03000
]
Prokaryotic type
Helix-turn-helix
Other families
K6Q96_15915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
AAA
HTH_23
HTH_29
Mg_chelatase
AAA_2
HTH_1
HTH_28
AAA_3
Sigma70_r4_2
HTH_AsnC-type
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
USH02315
UniProt:
A0ABY4WSQ1
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Position
I:complement(3558276..3560162)
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AA seq
628 aa
AA seq
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MRVSEHIKEVQSVIEGSQTSRDDVIATSWTRCIDDYHLDPVVMQEAYIVPHTQLKEHRER
LDKLIRTAKYGLDALYHQVADHGYVLMLTDAEGVTVDYQGDASLTWELKKAGLYLGAEWS
EARAGTCGVGSCIYTGEALTVHQSDHFDATHSPLSCTAAPIYDVDGSLAAVLDISALHSP
EPKASQALTLQLVTSCTRRIEMAALMNTFRKEWVIRLSQSPAFLDVDPECAMAVDAEGRI
IGMTHSTQRLLSRIKGNDWRQPRALLGCSLSDFFNLDINELPALSRALPTEERLLATIHG
DLWFAHAIAPQPSSIRRRKKVVSGSLASLYGDDAKMADLAIKATTLSMSDLPLLLNGETG
TGKEFLAKAIHESSSRKSGPFIAINCAAIPESLIESELFGYADGAFTGARSKGKRGLIEQ
ANNGTLFLDEIGDMPLSLQARLLRVLAERELLPVGATKAIPVSFRVLAATHKSLPELVKN
GSFREDLFYRINGATLTIPSLRERSDILWLAEILITKLVDRTVCVSVSAGHILERYDWPG
NIRELENMLQFALAFCEGNELLPEHLPEQLLNAKRLTFREAESAGGTLEVLEACGWNISK
AAKVMGVDRSTVHRRIKKAGIKRRYDTD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcagtgaacacatcaaggaagtgcaaagcgttattgaggggagtcaaacatcc
cgtgacgatgttattgccacgtcttggacaaggtgtatcgacgattatcatcttgatcct
gtcgtgatgcaggaggcatatattgttccccatacccagctcaaggaacatcgtgaacgg
ctcgataagctaattcgcacggcaaagtacgggctcgatgctttgtatcatcaggtggcg
gatcacggttatgtgttgatgctgacagatgctgagggcgtgacggtcgattatcaggga
gatgcatcactcacctgggagctgaaaaaagctgggctctacctcggggcagaatggtct
gaagcgcgggcgggcacctgcggagtcggttcttgcatctatactggtgaagcgttaact
gtacatcagagtgatcactttgatgctacgcattcgccactttcctgcacagcagcaccg
atttacgatgtagatggttcattagcagcggtgttggatatctctgcgctccatagcccc
gaacccaaagccagtcaggcgctaaccttgcaactcgtcacttcctgcactcgtcgcatt
gaaatggcggcactgatgaataccttccggaaggaatgggtcatccggctcagccaatct
cccgcgtttttagatgtggatcctgaatgtgccatggcggtagatgccgaaggaaggatc
attggaatgacacatagtacccaacgcctgctttcacggattaaaggcaatgactggcgg
caaccacgcgcactattgggttgttcgctgtcggactttttcaatctcgatatcaacgag
cttcccgcgctcagtcgagcacttcccacggaagaaagattgctggctaccattcatggt
gatttgtggtttgcccatgctatagccccgcagccttcttcaatacggcggcgtaaaaaa
gtcgtgagtggcagcttggcatcgctttatggtgatgatgccaagatggcggatttggca
atcaaagcgaccacgctatcaatgtcggatttgccacttctgctgaacggggaaaccggt
actgggaaagaatttttggccaaagccattcacgagagttcgtcacgtaaatccggccct
ttcattgctattaattgtgcggccatccctgaaagtctgattgaaagtgagctctttggt
tatgcagacggtgcctttaccggcgcgcgcagcaaaggcaaaagagggctgattgagcag
gccaacaacggcaccctgtttttggatgaaattggggatatgcctttgtcgcttcaggcc
agattgcttcgtgttttagcagaaagggaattgctgcccgtcggcgcaaccaaggctatc
cctgtctctttccgggtgcttgcggcaacacataaatccttacctgaactggtgaaaaac
ggcagttttcgtgaagaccttttctatcgtatcaatggtgccacccttacgattccttcg
ctcagagagcgaagcgatattctctggcttgcagaaatcttgatcaccaaactggttgat
cgcactgtctgtgtttcagtctctgccggtcacatacttgagcggtatgactggccaggc
aatattcgagaactggaaaatatgctgcagtttgcgctggccttttgtgagggaaatgag
ctgttgcctgaacaccttcctgagcagttgttaaacgcaaagcgcctgacttttagggaa
gctgaatctgccggaggaacgcttgaggtactcgaagcctgtggttggaacatttcgaaa
gcggcgaaagtaatgggtgtcgatcgctcaacggtacatcggcgaatcaaaaaagcgggt
attaagcgccgatatgacacggattga
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