KEGG   Grimontia kaedaensis: K6Q96_16310
Entry
K6Q96_16310       CDS       T09175                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
gkd  Grimontia kaedaensis
Pathway
gkd03030  DNA replication
gkd03410  Base excision repair
gkd03420  Nucleotide excision repair
gkd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gkd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K6Q96_16310 (polA)
   03410 Base excision repair
    K6Q96_16310 (polA)
   03420 Nucleotide excision repair
    K6Q96_16310 (polA)
   03440 Homologous recombination
    K6Q96_16310 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gkd03032]
    K6Q96_16310 (polA)
   03400 DNA repair and recombination proteins [BR:gkd03400]
    K6Q96_16310 (polA)
Enzymes [BR:gkd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K6Q96_16310 (polA)
DNA replication proteins [BR:gkd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     K6Q96_16310 (polA)
DNA repair and recombination proteins [BR:gkd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     K6Q96_16310 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K6Q96_16310 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH Prok-E2_E Spc110_C
Other DBs
NCBI-ProteinID: USH02379
UniProt: A0ABY4WS02
LinkDB
Position
I:complement(3642912..3645707)
AA seq 931 aa
MATTSDNPLILVDGSSYLYRAYHASPNLTNANGEPTGAVYGVVNMLRSLVKQYPQSHVAV
IFDAKGKTFRDDMYTEYKAHRPPMPDDLRSQIAPLHQIIEAMGFPMLVIEGVEADDVIGT
LAVQGSKAGMPILISTGDKDMAQLVDENVTLINTMTNVIMTPQGVHDKYGFGPEHIIDYL
ALMGDKVDNIPGVPGVGEKTATALIAGIGGIDALYDNLDKIADLSFRGSKTMAKKLEDNK
ENAYLSYQLATIKLDCELPFKPEELINRAADNEKLVELFTELNFKRWLAEAQSGIAGVDA
VAERAASGASSAKSSAKAEATFEAAAIDRGQYETILTEEDFQRWMEKLKKTNVVAFDTET
DSLDYMEANLVGISFAVAEGEAAYLPLTHDYLDAPKQLDRDWVLEEMKAWLENAGALKVG
QNLKYDASVLARYDIAMRGIAYDTMLESYVFNSVAGKHDMDSLALRYLQHKCISFEEIAG
KGKKQLTFNQIEMDQASPYAAEDADVTLRLHNALMAQLNNDEKLKVIFEQYEMPLVPVLS
RIERHGVLISAEMLAKQSQEIAIRLDELEKETYEIAGEEFNLSSPKQLQAILFEKMGLPV
LKKTPSGTPSTNEEVLQELALDYPLPKRILEYRGLAKLKSTYTDKLPKMVKPATGRVHTS
YHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFIAPAGKTILAVDYSQIELRIMAHLS
GDEALIDAFRHGKDIHAATAAEVMGIDISDVTSEMRRRAKAINFGLIYGMSAFGLAKQLG
IPRGEAQQYMERYFERYPGVRQYMETTRLQAAEQGYVETIFGRRLHLPEIKSSNAMRRKG
AERAAINAPMQGTAADIIKRAMILVDAWIQTQPEGRVALIMQVHDELVLEVDTEHLSDIE
QQVCKLMESAALLEVPLVAESGSGENWDQAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggcgacgacttctgataacccgttgatcctggtcgacggctcttcttatctctaccgc
gcgtaccacgcttctcccaacctgaccaatgccaatggcgagccaacaggtgccgtttat
ggcgtggtgaatatgctgcgcagcttggtgaaacagtatccgcaatctcatgtggcggtg
attttcgacgccaaaggcaaaaccttccgtgacgacatgtatacggaatacaaagcgcac
cggccgccaatgccggatgatctgcgcagccaaattgccccgctgcatcaaatcatcgaa
gccatgggcttcccgatgcttgtgattgaaggcgttgaagcggatgacgttatcggcaca
ttagcggtgcaaggttccaaagcagggatgccaattcttatcagtaccggtgataaagac
atggcgcagttggtggatgaaaacgtcaccctgatcaacaccatgaccaacgtgatcatg
acgccacagggcgtgcatgacaaatacggctttggcccagagcacatcatcgactatctc
gctctgatgggcgataaagtggataacatcccgggtgtaccgggtgtgggtgagaaaacc
gctactgcgcttatcgctggtatcggcggcatcgatgcgctgtatgacaaccttgataag
atcgcagaccttagctttcgtggctcaaaaaccatggcgaagaagctggaagataataaa
gagaatgcttacctctcttatcagcttgcgactatcaagcttgattgtgagttgccgttt
aagccggaagagctgatcaaccgcgcggcagataacgaaaagctggttgagcttttcact
gaactgaacttcaagcgctggctggcagaagcccaaagtggcatcgcaggtgtcgatgct
gttgcagagcgcgcagcttctggcgcttcatcagcgaaatcgtctgccaaagcagaagcg
acattcgaggccgctgcgattgatcgcggccaatacgaaaccatcctgacagaagaagac
ttccagcgctggatggagaagctgaagaaaaccaatgtcgtggctttcgataccgaaacc
gatagcctagactacatggaagccaatctggtggggatttcctttgccgttgctgaaggc
gaagcggcttacctgccgctgactcacgactatctggatgcgccgaagcagctcgaccga
gactgggtgctggaagaaatgaaagcctggctcgaaaacgctggtgccctgaaagtcggc
cagaacctgaaatacgatgcgagcgtgcttgctcgttacgatatcgcgatgcgcggcatt
gcttacgacaccatgttggaatcttacgtgttcaacagcgtggcaggtaagcatgacatg
gacagtctggcacttcgctacctgcagcataagtgcatcagctttgaagagattgccggt
aagggcaagaagcagctgacgttcaatcagattgaaatggatcaggcgtctccttacgca
gcagaagacgctgatgtcaccctgcgtttgcacaatgccctgatggcacagctcaacaat
gacgagaaactgaaagttattttcgagcagtacgaaatgccgctggtgccagttctttcg
cgtattgagcgccatggtgtgttgatcagtgcggaaatgctggcgaagcaatctcaggaa
attgcgattcgcttggatgagctcgaaaaggaaacttatgagattgctggcgaagaattt
aacctgagttcacccaagcagcttcaggcgatcctgttcgagaaaatgggtctgccagtg
ttgaagaagacaccatcaggcaccccttctaccaatgaagaagtgcttcaggagctggcg
ctggattacccgctgccaaaacgcattctggaataccgcggactggcgaagctgaaatcc
acttataccgacaaactgccgaagatggttaagccggctactggccgtgtgcacacttct
tatcatcaggcagtcacggcaacgggtcgtttgtcatcaaccgatccgaaccttcagaac
attccaatccgtaatgaagaagggcgtcgtatccgtcaggcgtttatcgcaccggcaggt
aagaccatcctggcagtcgactactcgcaaatcgaacttcgtatcatggcgcatctgtcg
ggtgatgaagccctgattgacgctttccgtcacggcaaagacattcatgcggcgactgct
gcagaggtgatggggattgatatcagtgacgtcacctctgaaatgcgtcgccgtgcaaaa
gcgattaacttcggccttatctatggcatgagtgcgtttggtctggcaaaacagctgggt
attcctcgtggcgaagcgcagcaatacatggaacgctacttcgagcgctacccaggtgtg
cgccaatacatggaaaccacccgattgcaggcggcggagcagggctatgtagaaacaatc
tttggccgccgtcttcacctgccggaaataaaatccagtaatgccatgcgccgtaaaggg
gcagagcgcgctgcaatcaacgccccgatgcaaggaaccgcggctgacattatcaaacgt
gcgatgattttggtggatgcgtggattcaaacccaacctgaggggcgtgtggcgctcatc
atgcaggttcacgatgaattggtgctggaagtagataccgaacacctttctgacattgag
caacaggtttgtaagttaatggaatctgctgcgctgctggaagttccgctggtcgctgag
tctggtagcggcgaaaactgggatcaggcgcattaa

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