Grimontia kaedaensis: K6Q96_16355
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Entry
K6Q96_16355 CDS
T09175
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gkd
Grimontia kaedaensis
Pathway
gkd03420
Nucleotide excision repair
gkd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K6Q96_16355 (uvrD)
03430 Mismatch repair
K6Q96_16355 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_16355 (uvrD)
Enzymes [BR:
gkd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6Q96_16355 (uvrD)
DNA repair and recombination proteins [BR:
gkd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K6Q96_16355 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K6Q96_16355 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
USH02388
UniProt:
A0ABY4WS58
LinkDB
All DBs
Position
I:complement(3654357..3656534)
Genome browser
AA seq
725 aa
AA seq
DB search
MDVSHLIDGLNDKQREAVAAQLGNYLVLAGAGSGKTRVLVHRIAWLMQVEYASPFSVMAV
TFTNKAAAEMRGRIEQLMQGTASGLWCGTFHGLCHRILRAHHLDANLPQDFQILDSDDQQ
RLLRRLIKAQNLDEKHWPARQASWYINAKKDEGLRPHHIDAQFDPVEKTWLRVYAAYQEA
CDRAGLVDFAELLLRCHELLRDKEHIREHYQARFQHILVDEFQDTNNIQYAWLRMMAGNS
AKVMIVGDDDQSIYGWRGAKIENISRFLQDFPGAETIRLEQNYRSTGNILKASNHLIENN
AERMGKSLWTEGQEGELISVYSAFNELDEARFVVGKIKAWQDEGGALNDTAILYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIKDALAYLRMIGNRFDDAAFERVVNTPARGLGD
RTLETIRLAARDRGATMWEASNQLLEEQVLAGRAANSLRRFVELVNALEDDTREMALFQQ
TDYVIQHSGLRAMYEAEKGEKAQARIDNLEELVTATRQFEVPEEVQEEMSPLSAFLSHAA
LEAGEGQADEFDDAAQLMTLHSAKGLEFPMVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMKKLYITHAEMRRVYGKDMFHKASRFIRELPEDCLEEVRMRAKVSRPAAASGR
FSQTQTQENFNQTGFSLGQRVQHPKFGEGTIINFEGSGQQSRVQVAFNGEGIKWLVTQYA
KLEAM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcccacctgattgacggtctgaatgacaaacaacgcgaggcagtggctgct
cagcttggcaactatcttgttctggcgggcgcaggcagtggtaaaacacgtgtgctggtt
catcgtattgcctggttaatgcaggttgaatatgcttcgccgttttcggtgatggcggta
acttttaccaacaaagccgctgcagaaatgcgcgggcgtattgagcagttgatgcagggc
acggcttccggtctttggtgcggcactttccacggtttgtgtcaccgtattctccgtgcc
caccatctggatgcaaacctgccgcaggactttcagatcctggactcagacgatcaacag
cgtctgcttcgccgcctgatcaaagcgcagaatctggatgaaaaacattggcctgcgcgt
caggcgtcttggtacatcaacgccaagaaagacgagggcctgcgcccgcatcacatcgat
gcccagtttgatccggtagagaaaacctggctgcgtgtttacgctgcttatcaggaagcc
tgtgaccgtgcaggtttggtggattttgcggaattgctgctgcgttgccacgagctgctg
cgtgataaagaacatatccgtgagcactatcaagcgcgtttccagcacattctggtggat
gagttccaggataccaacaacatccaatatgcttggctgcgtatgatggcgggcaacagt
gccaaagtgatgatcgtaggtgatgacgaccagtccatctatggttggcgcggtgcgaaa
atcgagaacatctctcgcttcctgcaggacttccctggcgctgaaaccatccgtcttgag
cagaattaccgctcgaccggcaacatcctgaaagcgtctaaccacctgattgaaaacaat
gccgagcgcatgggaaagagcctgtggacggaaggtcaggaaggtgaattaatttctgta
tacagtgcgtttaacgagttagatgaagcccgcttcgtagtgggcaaaatcaaagcctgg
caagacgaaggcggcgcgctgaatgacactgcgattttataccgaaacaacgcccaatcc
cgtgtgcttgaagaggccttgattcaggcaggtctgccgtaccgcatttacggtggtatg
cgattcttcgaacgtcaggaaatcaaagatgcgctggcgtaccttcgcatgattggtaac
cgttttgatgatgcggctttcgaacgcgtggtgaatacgccagcacgtggtcttggcgat
cgcaccctcgaaaccatccgtcttgctgcgcgtgatcgcggagcaaccatgtgggaagcg
agtaaccagctgcttgaagagcaggtgctggcaggccgcgctgcaaactctttgcgccgt
tttgtcgagctggtgaatgcgctggaagatgacacccgcgaaatggcgcttttccagcaa
acggactacgtgatccagcactccggccttcgcgctatgtacgaagcagagaaaggtgaa
aaagcgcaagcgcgcattgataaccttgaagaactggtcacagctacccgtcagtttgaa
gtgccggaagaggtgcaggaagaaatgtcgccactgtcggcgttcctctctcatgccgcg
cttgaagctggtgaaggtcaggctgatgagtttgacgatgcggcacagctaatgacattg
cacagtgccaaaggccttgagtttcccatggtgttcatggtgggtgttgaagaaggcatg
ttcccaagccagatgtcggcggaagaagccggacgtttggaagaagagcgtcgcctttgt
tatgtcggcatgacccgtgcgatgaaaaagctctacatcacccacgcggaaatgcgccgt
gtttacggcaaagacatgttccataaggcgtcgcgatttatccgcgaactgcctgaagat
tgcctggaagaagtgcgaatgcgcgcgaaagtgtcgcgtccagccgcagcatccgggcgt
ttctcgcaaacccagacccaagagaactttaaccagaccgggttctcgcttggccagcga
gtgcagcacccgaaattcggtgaaggcaccatcatcaactttgaaggtagtggtcagcag
agtcgtgtacaggtggcgtttaacggggagggtatcaaatggttggttacccaatacgcc
aagcttgaagcgatgtga
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integrated database retrieval system
