Grimontia kaedaensis: K6Q96_20710
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Entry
K6Q96_20710 CDS
T09175
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkd03400
]
K6Q96_20710 (phrB)
Enzymes [BR:
gkd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K6Q96_20710 (phrB)
DNA repair and recombination proteins [BR:
gkd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K6Q96_20710 (phrB)
Prokaryotic type
K6Q96_20710 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
USH05614
UniProt:
A0ABY4X2Y6
LinkDB
All DBs
Position
II:complement(865145..866596)
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AA seq
483 aa
AA seq
DB search
MKLVWFRRDLRIKDNIALTEACRSGEPVMAIYYETPVQWRSHRMAPIQADLIRRRLAVLQ
QELEALNIPLLIRSVDTFRDVNQSLAQLCQQYQIADIYCTRDYESDEVNRDNSIAGILSL
TGTLLHRFDYKCIFGPGTITNGAGNTYRVFTPFKKAWIARATQENLSPLSAPEPVQTNSI
TSSLLRQPFSISLRYPQTDSVGWPIDDSAIIQRLRDFCRYRVDQYDSTRDFPAIPATSQL
SPYLAIGALSPRQCLARLLVEEPNCFDKSSGGANVWLSELVWREFYQHIVAAYTDISKGK
AFLEWTDSIEWNRDEILFERWKQGRTGYPIVDAAMRQLNDTGWMHNRLRMIVASFLVKDL
HINWRWGEQYFMCKLIDGDFAANNGGWQWSASVGTDAQPYFRVFNPTAQSKKFDPNVRFI
RRWLKELESVPDKSLHEPHVWAEKNGIELSYPKPVVDHKQAREKAIQMFEVAKSYQNTHR
AES
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtttggttcaggagagaccttaggattaaagacaatatcgctttgacagaa
gcctgccgaagtggtgaaccagtcatggccatttactacgaaacgccagttcagtggcgt
tctcacagaatggcacccattcaggctgatctcattcgccgtcgtcttgctgtacttcag
caagaactggaagcgctgaatattcccttactgattcgttccgttgacacgtttagagac
gttaaccagtctttggcacagctttgccagcaataccaaattgctgatatctattgcaca
agggattacgaatctgatgaagtaaaccgtgataactctatcgccggaatacttagctta
acggggacgctgcttcatcgcttcgattataagtgtatctttggtccaggaactattact
aatggtgctggaaatacatatcgcgtttttacacctttcaagaaagcctggattgctcga
gcaacgcaggaaaacttatctcctcttagtgcgcctgaacctgtgcaaaccaattccatc
acttcatctcttttgcgccaaccgttcagcatttctctgcgatacccgcaaacagactca
gtgggttggccaatcgatgacagtgctatcattcagagactgcgtgatttctgccgatat
cgcgtagaccagtatgattcgacaagagatttcccggcgattccagctaccagccaactg
tctccctatcttgccattggtgcattatcgccacgtcagtgtctggctcgtttgttggtt
gaagagcctaactgcttcgacaaaagctcaggaggggcgaacgtttggctctctgaattg
gtgtggcgagagttctaccaacatatcgttgctgcgtacacagatatcagtaagggaaaa
gcgttccttgaatggacagactccattgaatggaaccgcgacgagatcttgtttgaacga
tggaaacaggggcgaactggctatccaatcgtagatgccgccatgcgtcaattgaatgat
acaggttggatgcacaaccgccttcgcatgattgttgccagctttttggtgaaagacctt
cacatcaattggcggtggggggagcaatattttatgtgcaagctgatcgatggtgatttt
gccgcgaataatggtgggtggcaatggtctgcatctgtaggcaccgatgcccaaccttat
tttcgggtgtttaatcccactgcgcagagtaagaaatttgatcctaacgtgcgttttatc
cgtagatggttgaaagaactagagtctgtcccggacaagtcactccacgaaccccatgtt
tgggcagagaaaaacggaatagagctctcctaccccaaaccggttgtagaccataaacag
gcgcgggaaaaagccatccaaatgttcgaggtggcaaaaagctatcagaacacgcacagg
gcagaatcatga
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