Gallaecimonas kandeliae: PVT67_02955
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Entry
PVT67_02955 CDS
T09225
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PVT67_02955 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_02955 (recD)
Enzymes [BR:
gkn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PVT67_02955 (recD)
DNA repair and recombination proteins [BR:
gkn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PVT67_02955 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
Mg_chelatase
nSTAND3
NTPase_1
DEAD
PIF1
UvrD_C
T2SSE
ATPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WKE66222
LinkDB
All DBs
Position
complement(616158..618065)
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AA seq
635 aa
AA seq
DB search
MPLDNLEPLLDAWVERGWLRRLDRALGRFLGELLPGADPRVLLAACLCSHQLGRGHICLD
LAATLADPDGALSLPPEGDFGEELPALPSALLAGLSLDAWLAALAASPLVDQGPGEQPLV
LGGGRLYLRRYWQYEQQLAGQIRARLAQRLALPSDLGPRLDALFPAGKGPDWQRIACALA
VRGNFTVITGGPGTGKTTTVVRLLGLLQQLAMDGGQKLRIQLAAPTGKAAARLTESIGGA
LAQLAVPQAVRAAIPTQVSTVHRLLGSIPGSRHFRHDAASPLHLDLLVVDEASMVDLELM
AQLLDALPGQARLILLGDKDQLASVEAGAVLGDLCEGAEAGGYDAETLAWLAPLAGADLG
DFGSAGTALAQHRAMLRQSHRFGEHSGIGQLARAVNAGEPDQVRAVLAAGYGDLARLDLT
KPQALARLVVSGHNGGQGHGHYLEVLRQHPKDDKDAWAKAVLAAFASFQLLSALRKGPWG
VEGLNALAAEALHGAGLIPATQGWYQGRPVLVSRNDYHLGLMNGDIGICLELEGALRVAF
LMPDGSVKWVLPSRLSDVDSVYAMTVHKSQGSEFAHCALVLPESLNPVLTRELVYTGITR
ARERFTLVAPVPGLLAAAVERRVLRSSGLREALRD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgataacctggaacccctgctggacgcctgggtggaaaggggctggctgcgc
cgcctggacagggcccttggccgcttcctcggcgagctgctgccaggcgccgatccccgg
gtgctgctggccgcctgcctctgctcccaccaactgggcaggggccatatctgcctggac
ttggccgccaccctggccgaccccgacggcgccctcagcctgcccccggagggggacttt
ggcgaggagctgcccgccctgccctcggcgctgctggccggcctgagcctggacgcctgg
ctggcggccctggccgcctcccccctggtggaccagggccccggggagcagcccctggtg
ctgggcggcggccgcctctacctgcgccgctactggcagtacgagcagcagctggccggg
cagatccgcgcccgcctggcccagcgcctggccttaccttcagatctcggcccccgcctg
gacgccctcttcccggccggcaaggggccggactggcagcgcatcgcctgcgccctggcg
gtgaggggcaacttcacggtgatcacggggggcccaggcaccggcaagaccaccacagtg
gtgcgcctgctgggcctgctgcaacagctggccatggacggcggccagaagctgcgcatc
cagctggccgcccccaccggcaaggccgccgcccgcctcaccgaatccatcggcggcgcc
ctggcgcagctggcggtgccacaggcggtgcgcgccgccatccccacccaggtcagcact
gtgcaccgcctccttggcagcatccccggcagccgccatttccgccacgacgccgccagc
cccctgcacctggacctgctggtggtggacgaggcctccatggtggacctggagctgatg
gcccagctgctggacgccctgcccggccaggctcggctgatcctgctgggagacaaggac
cagctggcctcggtggaagccggcgccgtgcttggcgatctctgtgaaggggccgaggcc
ggcggctacgacgccgagaccctggcctggctggcgcccctggccggcgccgatctgggc
gacttcggcagcgccggcacggccctggcccagcacagggccatgctcaggcagagccac
cgcttcggcgagcactccggcataggccagctggccagggccgtcaacgccggcgagccc
gatcaggtgcgcgccgtgctggccgccggctatggcgacctggcccgcctcgacctcacc
aaaccccaggccctggcaaggctggtggtctcaggccacaacggcggccagggccatggc
cattaccttgaggtgctgcgccagcaccccaaggacgacaaagacgcctgggccaaggcg
gtgctggccgccttcgccagcttccagttgctgagcgccctgcgcaagggcccatggggg
gtggaagggctcaacgccctggccgccgaggcgttgcacggcgccggccttatccccgcc
acccagggttggtaccagggcaggccagtgctggtcagccgcaacgactaccacctgggg
ctgatgaacggcgacatcggcatctgcctggagctggagggggccctgagggtggctttc
ctgatgccggacggcagcgtcaaatgggtgctgccctcaaggctttccgacgtggacagc
gtctacgccatgacggtgcacaagtcccagggctcggagttcgcccactgcgccctggtg
ctgcccgagtccctgaatcctgtgctgacccgggagctggtctatacgggcatcacccgc
gcccgcgagcgctttaccctggtggcgcccgtgcccggcctcttggccgccgccgtggag
cggcgggtgctgcggtcttcggggttgagggaggcgctcagggactga
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