Gallaecimonas kandeliae: PVT67_03760
Help
Entry
PVT67_03760 CDS
T09225
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03410
Base excision repair
gkn03430
Mismatch repair
gkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVT67_03760 (recJ)
03430 Mismatch repair
PVT67_03760 (recJ)
03440 Homologous recombination
PVT67_03760 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_03760 (recJ)
DNA repair and recombination proteins [BR:
gkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PVT67_03760 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PVT67_03760 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PVT67_03760 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WKE66377
LinkDB
All DBs
Position
794426..796150
Genome browser
AA seq
574 aa
AA seq
DB search
MPKITRRIIEAAPTDWPLPPLLARIYRSRGVQSLAELEKGAKALAPFDSLKGMAEAVRLL
AAALEAQKRILIVGDFDADGATSSALCLLALKALGAEQVDFLVPNRFEYGYGLSPEIVAV
AVERGAELLITVDNGISSIEGVAAAKAAGMAVLVTDHHLPGERLPDADAMVNPNLEGCAF
PSKALAGVGVAFYLMLALRAKLRESGWFADGAAPGRTEPNLAELLDIVALGTVADVVPLD
ANNRILVHQGLNRIRARRCRPGILALCEVAGREPARLVASDLGFFLGPRLNAAGRLDEMS
LGVSLLATDDLHQARLIAARLDSLNRERREIESSMQQEALAELGKIELGEVPAGIALYRE
DWHQGVIGILASRIKERFHRPVFAFAPANDTELKGSGRSIPGLHLRDLLDELDTANPGLI
LKFGGHAMAAGLSIRPTDFERFNAAFQAVAELKLEPHMLTGEILSDGELLPTEFNLETAQ
LLRDGGPWGQAFPEPVFDGHFKVVSQRLVGQKHLKLVLSPSGGEPMLDAIHFNADLNLWP
NPAIQWVRAAFKLDINEYKGRQSVQLLVDHLEQA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatcaccagaagaatcatagaggcagcgccgaccgattggcccttgccgccg
ttgctggctcgtatctaccggagccggggcgttcagagcctggccgagctggaaaaaggg
gccaaggccttggccccctttgacagcctcaagggcatggccgaagcggtcaggctgctg
gccgccgccttggaagcccagaagcgtatcctcatcgtcggcgatttcgacgccgacggc
gccaccagttcggccctctgcctgctggcactcaaggccctgggggcagagcaggtggac
ttcctggtgcccaaccgcttcgaatacggctacggcctgtcccccgagatagtggcggtg
gcggtggaacggggcgccgagctgctcatcaccgtggacaacggcatctccagcatagag
ggggtggcggcggccaaggccgcaggcatggcggtgctggtcacagaccaccacctgccc
ggggaacggctgccggacgccgacgccatggtcaaccccaacctcgaaggctgcgccttc
ccctccaaggccctggccggggtcggggtggccttctacctgatgctggccctgcgggcc
aagctgcgggagagcggctggtttgccgacggtgccgcgcccggccgtaccgagcccaac
ctggcggagctgctggacatagtggcgctgggtacagtggcggacgtggtgccgctcgac
gccaacaaccgcatcctggtgcaccagggcctgaaccgtatccgtgcccgccgctgccgc
ccgggcatcttggcgctgtgcgaagtggcgggccgtgagccggcccggctggtggccagc
gatctcggctttttcctggggccgcgcctcaacgccgccggccgcctggacgagatgtcc
ctgggggtcagcctgctggccaccgacgatctgcatcaggccaggctcatcgccgcccgc
ctcgacagcctcaaccgcgagcgccgggagatagagtcgtccatgcagcaggaggccctg
gccgagctcggcaagatagagctgggcgaggtgccggccggcatcgccctctaccgggag
gactggcaccagggagtgatcggcattttggcgtcccgcatcaaggaacgcttccacagg
cccgtgttcgccttcgccccggcaaatgataccgagctcaagggctctggccgctccatt
cccggcctgcacctgcgtgacttgctggacgagctggacaccgccaaccccggccttatc
ttgaagttcggcggccatgccatggcggcggggctctccatcaggccgactgatttcgag
cgcttcaacgctgccttccaggccgtggctgagctcaaactcgagccccatatgctgacc
ggcgagatcctctccgacggcgagctgttgcccaccgagttcaacctggagacggcccag
ctgctgcgtgacggtggcccctggggccaggccttccccgagccggtgttcgatggccac
ttcaaggtggtgagccagcggctggtgggccagaagcatttgaaactggtgctgagcccg
agtggcggcgagcccatgctggacgccatccacttcaacgccgacctgaacctctggccc
aatccggctatccaatgggtacgggcggccttcaagctggacatcaacgagtacaagggc
cgccagtcggtgcagttattggtggatcacctggaacaggcctag
DBGET
integrated database retrieval system
