Gallaecimonas kandeliae: PVT67_03995
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Entry
PVT67_03995 CDS
T09225
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVT67_03995 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gkn03019
]
PVT67_03995 (rnc)
03009 Ribosome biogenesis [BR:
gkn03009
]
PVT67_03995 (rnc)
03036 Chromosome and associated proteins [BR:
gkn03036
]
PVT67_03995 (rnc)
Enzymes [BR:
gkn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PVT67_03995 (rnc)
Messenger RNA biogenesis [BR:
gkn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PVT67_03995 (rnc)
Ribosome biogenesis [BR:
gkn03009
]
Eukaryotic type
90S particles
RNase
PVT67_03995 (rnc)
Prokaryotic type
rRNA processing factors
PVT67_03995 (rnc)
Chromosome and associated proteins [BR:
gkn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PVT67_03995 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
WKE66424
LinkDB
All DBs
Position
842479..843153
Genome browser
AA seq
224 aa
AA seq
DB search
MTYSLETLYRRLGYSFNDEKQVRQALTHRSAGSQHNERLEYLGDSILSFVIADALYHRFP
KANEGDMSRMRATLVKGKTLAELGAEFGLGDFLRLGPGELKSGGFRRESILADGVEALIG
AIYLDSDLASIRDLILKWYEKRLGAIQPGVAQKDPKTRLQEHLQGKRQPLPHYQVEKVEG
EAHQQTFTVSCLVEGLENPFMGVGSSRRKAEQAAAEQALEHLND
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacctattcccttgagaccctgtatcgccgcctcggctacagcttcaatgacgaaaag
caggtgcgccaggccctgacccaccgcagtgccggctcccagcacaacgagcggctggaa
tacctgggcgactccattttgagcttcgtcattgccgacgccctctaccaccgcttcccc
aaggccaacgaaggggacatgtcgcggatgcgcgccaccctggtcaagggcaagacgctg
gcggagctgggcgcggaatttggcctcggcgacttcctgcgcctgggcccgggtgaattg
aaatccgggggctttcgccgcgaatccatcctcgccgacggcgtcgaggcgctgatcggc
gccatctacctggactcggacttggccagcatccgcgacctcatcctcaagtggtatgag
aagcgcctgggcgccatccagcccggcgtggcccagaaggatcccaagacccgcctgcag
gaacacctgcagggcaagcgccaacccctgccgcactaccaggtggaaaaagtggaaggg
gaagcccaccagcagaccttcaccgtttcctgcctggtggaaggcctggaaaaccccttt
atgggcgtaggctccagccgccgcaaggcagagcaggccgccgccgagcaagctctggag
catctcaatgactga
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