Gallaecimonas kandeliae: PVT67_04135
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Entry
PVT67_04135 CDS
T09225
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gkn
Gallaecimonas kandeliae
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gkn03016
]
PVT67_04135
Enzymes [BR:
gkn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PVT67_04135
Transfer RNA biogenesis [BR:
gkn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PVT67_04135
Prokaryotic type
PVT67_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WKE66451
LinkDB
All DBs
Position
870127..871128
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AA seq
333 aa
AA seq
DB search
MTAKALFKTQPEDFFVEEVLGFEPEGEGEHLFVHIEKRGMNTQWAAKLLGEACGVKERDV
SHSGLKDRHAVTRQWLSVWLPGKETPDLAGLESIDLHILKARRHNRKLRIGTHKANGFRI
RLREVSEPALVEERLQKVAAEGFANIFGDQRFGQGERNLEIFDAVLAGKRMKKPRQAMAI
SAARSHLFNRVAEHRQTQGLMRQVLPGDVLMLAGSHSVFVAEEAELDSLQQRLAEGDVQL
TGPLWGKGGVGPQGDALALELAAVAAEGERCAGLEKLANGARRPLWLKPEIQWHWDGGDL
LLEFTLPTGSFATALLGNLAELVEPDRFSEAQA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaaggccctgttcaagacccagcctgaggacttcttcgtcgaggaagtgctg
ggcttcgaacccgagggcgaaggggagcacctcttcgtccatatcgaaaagcgcggcatg
aatacccagtgggccgccaagctgctgggcgaggcctgtggcgtcaaggagcgggatgtc
tcccactccggcctcaaggaccgccacgccgtcacccgccagtggctgtcggtctggctg
ccgggcaaggagaccccggatctggccggcctcgaaagcattgatctgcacatcctcaag
gcccgccgccacaaccgcaagctgcgtatcggcacccacaaggccaacggctttcgcatc
cgcctgcgcgaggtcagcgagccggccctggtggaagagcggctgcaaaaagtcgccgcc
gagggctttgccaatatcttcggcgatcagcgcttcggccagggggaacgcaacctggag
atcttcgacgccgtgctggccggcaagcgcatgaagaaaccgcgccaggccatggccatc
tcggcggcccgctcccacctgttcaatcgggtggccgagcatcgtcaaacccaggggctg
atgaggcaggtgctgcccggcgacgtgctgatgctggccggctcccactccgttttcgtc
gcagaagaagcggaactcgacagcctgcagcaacgccttgccgaaggtgatgtccagctc
acaggccccctctggggcaaggggggggtcggcccgcaaggtgacgcactggccttggaa
ctggcggccgtggccgctgagggcgagcgctgtgccggcctcgagaagctggccaacggc
gcccgccgccccctctggcttaagccggagatccagtggcactgggacggtggcgacctg
ctgctcgaattcaccctgcccaccggcagtttcgccactgccctgctcggcaacctggcc
gagctggtagagccggacaggttcagcgaggcccaggcatga
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