Gallaecimonas kandeliae: PVT67_04965
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Entry
PVT67_04965 CDS
T09225
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gkn
Gallaecimonas kandeliae
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gkn03016
]
PVT67_04965 (truB)
Enzymes [BR:
gkn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PVT67_04965 (truB)
Transfer RNA biogenesis [BR:
gkn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PVT67_04965 (truB)
Prokaryotic type
PVT67_04965 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WKE66603
LinkDB
All DBs
Position
1032775..1033704
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AA seq
309 aa
AA seq
DB search
MSKRRGKGRPVDGILLLDKPQGLSSNDALQKVKRIYFAQKAGHTGALDPLATGMLPICFG
EATKFSQYLLDSDKGYRVIAKLGVRTDTSDADGEVVSTRPVNVAPGDLLEALDKFRGPIM
QVPSMYSALKYQGKPLYKYAREGIEVPREARPITVYKLTLVRFEGDEVELDVECSKGTYI
RTIVDDLGEVLGCGAHVIMLRRTKVSGYPLERMVTLERLEAMLEKARADDVPPGQFLDAL
LLPLDSAVQDLPAVDVQAATAFYLKQGQAVQVPKAPAQGLVRILEEGTFIGVGDIDDDGK
VAPKRMVVR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgccgcggcaaggggcgccctgtcgacggcatactgctgctcgacaagccc
cagggcctgtcctccaacgacgccctacagaaggtcaagcgcatctacttcgcccagaag
gcgggacacaccggtgccctggatccgctggccaccggcatgctgcccatctgctttggt
gaggccaccaagttctcccagtacctgctggactcggacaagggttaccgcgtcatcgcc
aagctgggggtccgtaccgacacctccgacgccgacggtgaagtggtgtccacccggccg
gtgaatgtcgcacccggcgacctgctggaagccctggacaagttccgtggccccatcatg
caggtgcccagcatgtactcggccctcaagtaccagggcaagcccctctacaagtacgcc
cgtgaaggcatagaagtgccccgtgaggcccgccccatcaccgtctacaagctaaccctg
gtccgcttcgaaggcgacgaggtggagctggacgtggagtgctccaagggcacctatatc
cgcaccatagtggatgacctcggcgaagtgctgggctgcggtgcccatgtcatcatgctg
cgccgcaccaaggtctcgggttaccccctggagcggatggtgaccctggagcgcctcgag
gccatgctggaaaaggcgagggcggatgatgtgccgccagggcagtttctcgacgccctg
ctgctgccgctggacagcgccgtccaggatctgcccgccgtggacgtccaggccgccacc
gccttctacctcaagcagggccaggcggtgcaggtgcccaaggcaccggcccagggcctg
gtgcggatcctcgaagagggcaccttcatcggcgtcggcgacatcgacgacgacggcaag
gtagcccccaagcgcatggtggtgcgctga
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