Gallaecimonas kandeliae: PVT67_04975
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Entry
PVT67_04975 CDS
T09225
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVT67_04975 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gkn03019
]
PVT67_04975 (pnp)
03016 Transfer RNA biogenesis [BR:
gkn03016
]
PVT67_04975 (pnp)
Enzymes [BR:
gkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PVT67_04975 (pnp)
Messenger RNA biogenesis [BR:
gkn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PVT67_04975 (pnp)
Transfer RNA biogenesis [BR:
gkn03016
]
Prokaryotic type
tRNA degradation factors
PVT67_04975 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH_SLS1_2
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WKE66605
LinkDB
All DBs
Position
1034230..1036389
Genome browser
AA seq
719 aa
AA seq
DB search
MKPIIKSFQYGQHTVTLETGAVARQATAAVIASMDDTVVLVSVVGKKEADQSKDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPNGFKNEVQVVATVVSVN
PQVSPDIVAMIGTSAALAISGIPFAGPIGAARVGYINDNLVLNPTTEELKSSKLDLVVAG
TEGAVLMVESEAELLAEEVMLDAVMFGHQQMQTVITAINELAAEVGNPQWDWSAPEENTE
LKDKIKAIVWDKLGDAYRIQDKMERYAAIGAIKSELMESLLADDAELNTKEAGELFSKVE
KTLVRGRVLAGEPRIDGRDPQMIRALDVATGVLPRTHGSAIFTRGETQALVVATLGTQRD
AQILDELTGERTDHFLFHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVLAVMPSADEF
PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKSSVAGIAMGLVKEEDNFVVLSDI
LGDEDHLGDMDFKVAGSREGVTALQMDIKIEGITKEIMQVALKQAHDARIHILGVMDQAI
GAPREDISAYAPRIHTMKINPEKIRDVIGKGGSVIRALTEETGTTIEIEDDGTIKIAAVS
GDQAADAIRRIEALTAEVEVGRIYDGRVTKIVDFGAFVAILPGKEGLVHISQIAEQRIEN
VADYLQVGQEVKVKCLEVDRQGRVRLSIKEAMPKPVEEAAPAEAPAEADVAEAAEPKDE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccatcatcaagagcttccagtacggtcagcacaccgtcaccctggaaaccggt
gccgttgcgcgccaggctaccgctgccgttatcgccagcatggacgacaccgtcgtgctg
gtctccgttgtaggcaagaaagaagcggaccagtccaaggacttcttccccctgaccgtc
aactaccaggagcgtacctacgctgccggtaagatccccggcggcttcttcaagcgcgaa
ggtcgtccttccgaaggcgagaccctgaccgcccgcctgatcgaccgtccgatccgtccg
ctcttccccaatggcttcaagaacgaagtccaggtggtggccactgttgtctccgtcaac
ccccaggtcagccctgatatcgtcgccatgatcggcacctccgccgccctggccatctcc
ggcattcctttcgctggccccatcggtgccgcccgcgtcggttacatcaacgacaacctg
gtgctgaaccccaccaccgaagagctgaagtcctccaagctggatctggtggttgccggt
accgaaggcgccgtgctgatggtggaatccgaagccgagctgctggctgaagaagtgatg
ctggacgccgtcatgttcggccaccagcagatgcagaccgtcatcaccgctatcaacgag
ctggccgccgaagtgggcaacccccaatgggattggagcgctccggaagagaacaccgag
ctcaaagacaagatcaaggccattgtctgggacaagctgggcgacgcctaccgcatccag
gacaagatggagcgctacgccgccatcggtgccatcaagtccgaactgatggaaagcctg
ctggccgacgacgccgaactcaacaccaaggaagcgggcgagctcttctccaaggtcgag
aagaccctggttcgtggccgcgtactggccggcgagccccgtatcgacggtcgtgacccc
cagatgatccgtgccctggacgtggccacaggcgtgctgccccgcacccacggctccgcc
atcttcacccgtggtgagacccaggccctggtggttgccaccctgggtacccagcgtgac
gcccagatcctggacgagctgaccggtgagcgcaccgaccacttcctgttccactacaac
ttccctccttactgcgtaggcgagaccggcatgatgggcagccccaagcgccgcgaaata
ggccacggccgcctggccaagcgcggcgtcctggccgtaatgccctctgccgatgaattc
ccctacacagtgcgtgtggtttccgagatcaccgaatccaacggttcctcctccatggct
tccgtctgtggttcctccctggcgctgatggacgctggcgtgccgatcaagtcctccgtg
gccggtatcgccatgggcctggtcaaggaagaagataacttcgtggtgctgtccgacatc
ctgggtgacgaagaccacctgggcgacatggacttcaaggtggccggttcccgcgagggc
gtcaccgccctgcagatggacatcaagatcgaaggcatcaccaaggaaatcatgcaggtg
gccctgaagcaggcccacgatgcccgtatccacatcctgggtgtcatggaccaggccatc
ggtgcgccccgcgaagacatctccgcctacgccccccgtatccacaccatgaagatcaac
cccgagaagatccgtgatgtgatcggtaaaggtggcagcgtgatccgcgccctgaccgaa
gaaaccggcaccaccatcgagatcgaagacgacggcaccatcaagatcgccgccgtcagc
ggcgaccaggccgccgatgccatccgccgtatcgaagccctgaccgccgaagtggaagtg
ggccgcatctacgacggccgcgtgaccaagatcgtcgatttcggcgccttcgttgccata
ctgcccggtaaggaaggcctggtacacatcagccagatcgccgagcagcgcatcgaaaac
gtcgccgactacctgcaggtaggccaggaagtgaaggtcaagtgcctggaagtggaccgt
cagggccgcgtgcgcctgtccatcaaggaagccatgcctaagccggttgaagaggccgcc
cctgccgaggcgcccgccgaggctgacgtggccgaagccgccgagcccaaggacgaataa
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