Gallaecimonas kandeliae: PVT67_05960
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Entry
PVT67_05960 CDS
T09225
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn00521
Streptomycin biosynthesis
gkn00523
Polyketide sugar unit biosynthesis
gkn00525
Acarbose and validamycin biosynthesis
gkn00541
Biosynthesis of various nucleotide sugars
gkn01100
Metabolic pathways
gkn01110
Biosynthesis of secondary metabolites
gkn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PVT67_05960 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PVT67_05960 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PVT67_05960 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PVT67_05960 (rfbB)
00525 Acarbose and validamycin biosynthesis
PVT67_05960 (rfbB)
Enzymes [BR:
gkn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PVT67_05960 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
WKE66782
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Position
1220295..1221356
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AA seq
353 aa
AA seq
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MKLLITGGAGFIGSAVIRYIISNTNDCVVNVDKLTYAGNIENLAEVSGNSRYQFEKVDIC
DRTELERVFNEHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEVARQYWQGLPE
ARKQAFRFHHISTDEVYGDLHGTEDLFTEQTPYTPSSPYSASKASSDHLVRAWQRTYGLP
TLVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGKGDQVRDWLFVEDHARALYQVVT
QGQVGETYNIGGHNEKQNIEVVKMICSLLEEQAPKPDGVGRFEDLITFVKDRPGHDQRYA
IDASKIQRELDWVPQETFESGIRATVLWYLNNSEWCRRVQDGSYRRERLGVVQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacttatcactggcggtgcaggcttcattggttctgccgttatccgttacatt
attagcaatactaatgattgcgttgttaatgtcgataaattgacctacgctggcaatatc
gaaaatttggctgaagtgagcgggaactcacgttatcagtttgaaaaagttgacatatgt
gaccgtactgaattggagcgtgtgtttaacgaacatcaacctgatgcggtcatgcatctg
gctgcagaaagtcatgttgaccgctccattgacggccccgcggcttttatcgaaaccaat
attgtgggtacctacacactgctcgaggttgcgaggcagtattggcaagggctgccagag
gcacgcaagcaggccttccgctttcatcacatcagcaccgacgaagtttatggtgatctg
cacggcaccgaggatctattcaccgaacaaacaccctatacccccagttcgccgtactct
gcaagtaaagctagctctgatcatctggtgcgggcctggcagcgcacttacgggctgccg
acattggtaaccaattgctcaaataattacgggccctaccacttcccggaaaagctcatt
ccgctgatgatcctcaacgccttggaaggaaagcccttacctgtctatggcaagggtgat
caagtccgtgactggctttttgttgaagatcacgcgcgggcactctatcaagtcgtcaca
caaggccaagtgggggagacctacaatatcggtggacataacgaaaagcagaatatcgag
gttgtgaagatgatttgctcgctgttggaggagcaggcccccaagccggatggagtgggg
cgctttgaagacttaataaccttcgttaaagaccgtccaggccacgatcagcgctatgcc
attgatgccagtaagatccaacgtgaactggactgggtgccacaagagactttcgaaagt
ggcattcgtgcaacagtgctttggtatctcaataattccgagtggtgccggcgagtacag
gatggctcctatcggcgagaacgattgggagtcgtgcagtga
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