Gallaecimonas kandeliae: PVT67_12205
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Entry
PVT67_12205 CDS
T09225
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03030
DNA replication
gkn03430
Mismatch repair
gkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVT67_12205 (dnaX)
03430 Mismatch repair
PVT67_12205 (dnaX)
03440 Homologous recombination
PVT67_12205 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gkn03032
]
PVT67_12205 (dnaX)
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_12205 (dnaX)
Enzymes [BR:
gkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVT67_12205 (dnaX)
DNA replication proteins [BR:
gkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVT67_12205 (dnaX)
DNA repair and recombination proteins [BR:
gkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVT67_12205 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_16
AAA_14
AAA_5
AAA_18
PIF1
AAA_2
TsaE
AAA_30
Mg_chelatase
AAA_19
nSTAND3
AAA_7
AAA_assoc_2
Flg_hook
Herpes_Helicase
AAA_28
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WKE64438
LinkDB
All DBs
Position
complement(2452240..2454576)
Genome browser
AA seq
778 aa
AA seq
DB search
MAYQVLARKWRPQQFSALVGQEHVVRALNNALAQNRLHHAYLFTGTRGVGKTTLARIFAK
SLNCETGVTPTPCGQCSTCLEIERGNFVDLIEVDAASRTKVEDTREILDNVQYRPSRGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKSLSP
ELISNHLSYVLGEEQLGFEAPALKLLAKAANGSMRDALSLTDQAIAHGNGQVLLDNVQSM
LGTLDNRHAEHLLAAVVAGEGATLLAAIEQVAMMSPDYHGLLGDLLTLLHQAAIAQQLPG
TQEEAAEQLATALSPQQLQLFYQMVLHGRRDLPFCPDPRMALEMTLLRMLAFDIDNQAQP
VPAPRAKAPLPRLQAMPAAQQAELKPVVVEPVAPVMATPAQAPAPEIEPAPSPATAPRPV
MQAPPVVHEDDLAAQQAHLMAMAEAQGFRPQGEAVSPSAPAPQPAQQPVVDAKAPAPANP
TDQMLAARQAIKARQEGDGTKKPEAAPVPKPVERRPAAQSVPAPVKNEPQPAPALVEAGW
DDAPPWLDDEPQPISEGLVPPWLEDEPQAATLAELAPVPQRFDAPAPGQPLAGGPAANGA
AARHEEVASGAPAGALGEDSVGGPAGTPSGDSLGSPKGAPYPGVTKALAEAREDDRFWFE
CCEQLPIGGFVRQLALNSVWQPQGQDWLLLLTPAQKHLARNLEDLADALAQAGLHEGQLQ
VQVAEHPEGRESPLALSNRILASCQAHAEASLAQDPRVGEFITLFDAELVADSVRPIM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcaggtactggcgcgtaagtggcggccccagcaattctcggcgctggtgggc
caagaacacgtggtgagggcgctcaacaatgccctggcccagaaccgcctgcaccacgcc
tacctcttcaccggcacccgcggtgtcggtaagacgaccctggcgcggatcttcgccaag
agcctcaactgcgagacgggcgtcacccccaccccctgcggccaatgcagcacctgcctg
gagatagagcgcggcaatttcgtcgacctcatcgaggtggatgccgcctcgcgcaccaag
gtggaagacacccgcgagatcctcgacaacgtccagtacaggcccagtcgcggccgctac
aaggtgtacctcatcgacgaagtgcacatgctgtcccggcattccttcaacgccctgctc
aagaccctggaagagccgccggagcacgtcaagttcctgctggccacgacggatccccag
aagctgccggtcaccatcctgtcccgctgcctgcagttcaacctcaagagcctgagcccc
gagctcatcagcaaccacctgagctatgtgctgggtgaagaacagctgggcttcgaggcg
ccagccctcaaactgctggccaaggccgccaacggctccatgcgtgacgccttgagcctc
accgaccaggccatagcccacggtaacggccaggtgctgctggacaacgtccagtccatg
ctgggcaccctcgacaaccgccacgccgagcacttgctggcggccgtggtggcaggggag
ggggccacgctgctggccgccatagagcaggtggccatgatgtcgcccgactaccacggg
ctgctgggggatctgctgaccttgctgcaccaggccgccatagcccagcagttgccgggc
acccaggaagaggcggccgagcaactggccaccgccctgagcccccagcaattgcagctc
ttctaccagatggtgctgcacggccgccgcgacctgccgttctgccccgatccgcgcatg
gccctggaaatgacgttgctgcggatgctggccttcgatatcgacaaccaggcccagccg
gtgccggctcccagggccaaggcgccgctgcccaggctgcaggcaatgcctgcagcgcag
caagcagaattaaaacctgtcgtggtcgaaccggtagcccctgtgatggcgaccccagcc
caggcgccggcaccggaaatcgaaccggcgccatcgcctgcgacggcgccacggcctgtc
atgcaggcaccgccggtagtccacgaggacgatctggccgcccagcaggcccatctgatg
gccatggccgaggctcagggcttcaggccccagggtgaggcggtgagtccttcggcacca
gcccctcaaccggcgcaacagccggtggtggacgccaaggccccggcgccggccaacccc
acggaccagatgttggcggcccgccaagccatcaaggcccgccaggagggcgacggcaca
aaaaagcctgaagccgcgccggtgcccaagccggtggagcgccgccctgccgcgcagagc
gtgccggccccagtaaagaatgaaccccagccagctcccgctttggtcgaggccggctgg
gacgatgcgcccccttggctcgatgacgaaccccagccgatcagcgagggcttggtgccc
ccctggttggaagacgaaccccaggccgcgaccctggccgagttagccccggtaccgcag
cgtttcgatgctccggcccccggccaacccctggcgggcgggcccgcggcaaacggagct
gcagccaggcatgaagaggtagcatctggcgcgccggcaggcgccttgggcgaggacagc
gtcggcggcccagcgggcactccttcgggggactctttggggagcccgaagggcgcccct
taccccggggtgaccaaggccctggcggaggcccgcgaagatgaccgtttctggttcgaa
tgctgcgagcagctccccatagggggcttcgtgcgccagttggcgctcaattcggtctgg
cagccgcaaggccaggactggctgttgctgctgaccccggcccagaagcacctggcgcgt
aacctggaggatctcgccgacgccctggcccaggccgggctccatgagggccagctccaa
gtacaggtggccgaacacccagaagggcgggagagcccccttgcgctctccaaccgtatt
ttggcaagctgccaggcccatgccgaggcatccctggcccaagatcccagggtaggcgaa
ttcataaccctgtttgatgcagaactggtggcggacagcgtccgcccgatcatgtga
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