Gallaecimonas kandeliae: PVT67_15125
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Entry
PVT67_15125 CDS
T09225
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVT67_15125 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gkn03019
]
PVT67_15125 (rppH)
Messenger RNA biogenesis [BR:
gkn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PVT67_15125 (rppH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Ycf15
Motif
Other DBs
NCBI-ProteinID:
WKE64979
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All DBs
Position
complement(3075734..3076234)
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AA seq
166 aa
AA seq
DB search
MIDNDGFRPNVGIVICNQQGQVLWARRRGQHSWQFPQGGINDGESAEQAMYRELWEEVGL
KRKDVKILAVSRHWLRYRLPKRMVRKEQAPVCIGQKQKWFLLQLTSPESAVNLGATGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRRVMKEFASLAMPFARNDRRRA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataacgacggttttcgtccaaatgtcggcatagtgatttgcaaccagcagggc
caggtgctctgggccaggcgccggggacaacattcctggcaattcccccaaggcggtatc
aacgacggggagtcggccgagcaggccatgtacagggagctttgggaggaagtgggactc
aagcgcaaggatgtcaagatcctggccgtgtcccgccactggctgcgttacaggctgccc
aaacgcatggtccgcaaggaacaggccccggtctgcataggccagaaacagaaatggttc
ctgctgcaactcacttcgcccgaatcggcggtcaacctgggggccacaggccacccggaa
tttgacgactggcgctgggtttcttactggtatcccgtacgccaggtggtgtccttcaag
cgggatgtgtaccggcgggtcatgaaggagttcgcctccctggccatgccctttgcccgc
aacgacagaaggcgagcctga
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