KEGG   Gallaecimonas kandeliae: PVT67_16420
Entry
PVT67_16420       CDS       T09225                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
gkn  Gallaecimonas kandeliae
Pathway
gkn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gkn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PVT67_16420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gkn02022]
    PVT67_16420
Two-component system [BR:gkn02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   PVT67_16420
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 HTH_50 AAA_5 AAA_16 nSTAND1 Mg_chelatase HTH_30 AAA_7 HTH_28 AAA_18 AAA_2
Other DBs
NCBI-ProteinID: WKE65227
LinkDB
Position
3321042..3322388
AA seq 448 aa
MNGRILLVDDEAAFCELASDWLTDDGYQVQSAQSLAEAQDKLAHFDADLILLDLALPPQM
DPQHTLEALPSLGDRPVIILTGHAERQLALKAMAAGAWDFLAKPLDPDMLAVVIRRALTK
QALSKELSRLREGDSGPLDELVGSSQAMASLKALIQRIAPTDVPVLVTGPSGTGKEVVSR
ALHRLSRRAEGPFVSVHCGAIPAELLESELFGYKKGAFTGADRDRPGLLALADGGTLFLD
EIGDMPLPMQVKLLRVLQEGTFYPVGGREQQRIEVRLVSATNVDLPQRVAEGRFREDLYY
RIKGVNLVTPALKDRPEDLPLLCSALLAAWCKRNHRQLRLSPAAHQWFLGRDWPGNVREL
KNSLESVAAIAQGQEVGLEDIALLYPSAAAEPALAADASLDEQVRALEIRLIGQALAQHQ
GNRSAAARQLGLSRQGLLKKLERYGLGA
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgaacggtcgcatcctgctggtggacgacgaagccgccttctgcgaactggccagcgac
tggctgacggacgacggctaccaggtgcagagcgcccagagcctggccgaggcccaggac
aagctggcccatttcgatgccgaccttatcctcctggatctggccctgccgccgcagatg
gacccacaacacaccctggaagccctgcccagcctcggtgacaggcccgtcatcatcctc
accggccatgccgaacggcaactggccctcaaggccatggccgccggcgcctgggacttc
ctggccaagcccctggatccggacatgctggcggtggtgatccgccgggccctgaccaag
caggccctgagcaaggagctgtcacggctgcgcgagggcgatagcggccccctggatgag
ctggtgggctccagccaggccatggccagcctcaaggccctgatccagcgcatcgccccc
acggacgtgcccgtactggtcacaggcccttccggcaccggcaaggaagtggtgagccgg
gctttgcaccggctctcgcggcgcgccgaggggcccttcgtgtcggtgcactgcggcgcc
ataccggcggagctgctggagagcgaactgttcggctacaagaagggggccttcaccggc
gccgaccgtgaccggcctggcctgctggccctggccgacgggggcaccctcttcctcgac
gagataggggacatgcccctgcccatgcaggtcaaactgctaagggtgttgcaggaaggc
accttctacccagtagggggccgcgagcagcagcgcatcgaggtaaggctggtgtcggcc
accaacgtcgacctgccgcagcgggtggccgaagggcgctttcgcgaggacctctactac
cgcatcaagggggtcaacctggtcacccccgcactcaaggacaggcctgaagatctgcca
ctgctgtgcagcgccctgctggcggcctggtgcaagcgcaaccaccgccagctgcggctc
agcccggccgcccaccagtggttcctgggccgggactggccaggcaacgtgcgggagctg
aagaacagcctggagtcggtggcggccatagcccagggccaggaagtgggcctggaagac
atagccctgctctaccccagcgccgccgccgagccggccctggccgccgacgccagcctg
gacgagcaggtgcgggccctggagatccgcctgatcggccaggccctggcccagcaccag
ggcaacagatccgccgccgcccgccagttgggcctgtcccgccaggggctgctcaagaag
ttggagcgctacggtctgggggcctga

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