Gallaecimonas kandeliae: PVT67_17545
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Entry
PVT67_17545 CDS
T09225
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03030
DNA replication
gkn03410
Base excision repair
gkn03420
Nucleotide excision repair
gkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVT67_17545 (polA)
03410 Base excision repair
PVT67_17545 (polA)
03420 Nucleotide excision repair
PVT67_17545 (polA)
03440 Homologous recombination
PVT67_17545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gkn03032
]
PVT67_17545 (polA)
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_17545 (polA)
Enzymes [BR:
gkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVT67_17545 (polA)
DNA replication proteins [BR:
gkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PVT67_17545 (polA)
DNA repair and recombination proteins [BR:
gkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PVT67_17545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVT67_17545 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
WKE65448
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All DBs
Position
3563463..3566237
Genome browser
AA seq
924 aa
AA seq
DB search
MATIPENPLILVDGSSYLYRAYYAPPHLTNSQGEPTGAIYGVVNMLKSLLRQFKPTEMAV
VFDAKGKTFRDELFEQYKAHRPSMPDDLRSQVAPLHTLVKAMGLPLIIIEGVEADDVIGT
LARKASQEGRPVLISTGDKDMAQLVDENVTLINTMTNTVLDPAGVVEKFGVGPELIIDFL
ALMGDKVDNIPGVPGVGEKTALGLLQGLGGMDSIYQSLDKVATLDFRGAKTMAKKLVDNE
EQARLSYLLATIKTDVDLSEEHLDLRIKEEDRDTLVEWYGKLEFRRWLAEVLDGKTAPQA
EAKGEAPAAAEEEIADPAGIDRDVYQLVNTEEALQAWIAKLEKAELFAFDTETTALDYMV
AELVGFCVAVSGGEAAYIPFGHSLLDETPQLPRDTVLEAFRPLLESEAHKKVGQNLKYDM
SVLANHGIALKGIAFDTMLESYVFNSVGGRHDMDSLSLKYLSHKTISFEDIAGKGVKQLT
FDQVAIKEAALYAAEDADVTMRLHEHLWPRLEKEPSLKSVLLDIELPLVPVLSRMERTGV
LIDPKLLGQQSLELAERIEALEKKAYELAGEEFNLGSPKQLQAILFDKMVIKPLKKTPTG
VPSVAEEVLQELALDHPLPKVIIEYRGLAKLKSTYTDKLPALIHPRTGRVHTSYHQAVTA
TGRLSSTDPNLQNIPVRTEEGRRIRQAFIAPKGRKILAADYSQIELRIMAHLSGDQGLLT
AFAEGKDIHAATAAEVFGVALAAVTSEQRRRAKAINFGLIYGMSAFGLARQLDIGRGEAQ
GYMDTYFERYPGVLDYMEKTRHSAEEKGYVETLFGRRLYLPEIKARNQARKKAAERAAIN
APMQGTAADIIKKAMLAVDAWIRNEVADKVSLLMQVHDELVLEVDEDFAEAAAAKVGALM
QGAAELAVPLLVEAGLGATWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatccccgaaaatccccttatcctggtagacggctcttcctatctctaccgc
gcctactatgccccgccccacctgaccaactcccagggcgaacctaccggggccatctac
ggcgtggtcaacatgctcaagagcctgctgcgccagttcaagcccaccgagatggcggtg
gtgttcgacgccaagggcaagaccttccgggatgagctgttcgaacagtacaaggcgcac
agaccctcgatgcccgacgacctgcgcagccaggtggcgcctttgcacaccctggtcaag
gccatgggcctgccgctcatcatcatcgaaggggtcgaggccgacgacgtcatcggcacc
ctggcccgcaaggcctcccaggaagggcgcccagtgctgatctccaccggcgacaaggat
atggcccagctggtggatgagaacgtgaccctgatcaacaccatgaccaatacggtgctg
gacccggccggggtggtggaaaagttcggcgtgggcccggagctcatcatcgacttcctg
gccctgatgggcgacaaggtggacaacattccaggcgtacccggggttggcgaaaagacg
gcccttggcctgctccagggcctgggtggcatggacagcatctaccagagcctggacaag
gtggcgaccctggatttccgcggcgccaagaccatggccaagaagctggtggacaacgaa
gagcaggcgcggctttcctacctgctggccaccatcaagacagacgtggatctcagcgaa
gagcacctggatctgcgcatcaaggaagaggaccgcgacaccctggtggaatggtacggc
aagctcgaattccgccgctggttggccgaggtgctggacggtaagacagccccccaggcc
gaggccaaaggtgaagcgccggccgccgcagaagaggaaatagcagaccccgccggcatc
gaccgcgacgtctaccaactggtcaataccgaagaggccctccaggcctggatagccaag
ctggagaaggccgaactcttcgccttcgacaccgagaccacggccctggactacatggtg
gccgagctggtgggcttctgcgtggccgtcagcggcggcgaggcggcctatatccccttc
ggccacagcctgctggacgagaccccccagttgccccgtgacaccgtcctcgaagccttc
aggccgctgctggaaagcgaggcgcacaagaaggtcggccagaacctcaagtacgacatg
agcgtgctggccaaccacggcatagcgctcaagggcatcgccttcgacaccatgctggaa
agctatgtgttcaactcggtcggcggccgccacgacatggacagcctctccctcaagtac
ctgtcccacaagaccatcagcttcgaggacatcgccggcaagggcgtcaagcagctgacc
ttcgaccaggtggccatcaaggaggcggctctctatgccgccgaggacgccgacgtcacc
atgcgcctccacgagcacctctggccgcgcctggaaaaggagcccagcctcaagtcggtg
ctgctggacatagaactgcccctggtgcctgtgctgtcgcgcatggagcgcaccggcgtg
ctcatcgatcccaagctgctcggccagcaaagcctggagctggcggagcgcatcgaggcc
ctggagaagaaggcctatgagctggccggcgaagaattcaacctcggcagccccaagcag
ctgcaggccatcctcttcgacaagatggtcatcaagcccctgaagaagacccccacaggc
gtgccttccgtggccgaagaggtgctgcaggagctggccctggaccatcccttgcccaag
gtgatcatcgaataccgcggcctggccaagctcaagtccacctacaccgacaagctgccg
gccctgatccatcccaggacaggccgtgtccacaccagctaccaccaggcggtcacagcc
acaggccggctgtcctccaccgatcccaacctgcagaacataccggtgcgcaccgaggaa
gggcggcgcatccgccaggccttcatcgcccccaaaggccgcaagatcctggccgccgac
tactcccagatagagctgcgcatcatggcccacctctcaggagaccagggcctgctgacc
gccttcgcagagggtaaggacatccacgccgccacggccgccgaagtcttcggggtcgcc
ttggctgcggtgaccagcgagcagcgccgccgcgccaaggccatcaacttcggcctcatc
tacggcatgtccgccttcggcctggcccgccagctggatatcggccggggcgaggcccag
ggctacatggacacctacttcgagcgttatcccggggtgctggactacatggaaaagacc
cgccacagcgccgaggaaaaaggctatgtggagaccctgttcggccgccgcctctacctg
cccgagatcaaggcccgcaaccaggcccgcaagaaggcggccgagcgcgccgccatcaac
gcacccatgcagggcacggccgccgacatcatcaagaaggcgatgctggcggtggacgcc
tggatccgcaacgaggtggccgacaaggtcagcctcttgatgcaggtacacgacgaactg
gtgctggaggtggacgaggacttcgccgaggccgccgcggccaaggtcggcgccctgatg
cagggagcagccgaactggcggtgcccctgctggtggaagccggcctgggcgccacctgg
gatgaagcccactga
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