Gallaecimonas kandeliae: PVT67_18215
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Entry
PVT67_18215 CDS
T09225
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn00300
Lysine biosynthesis
gkn00470
D-Amino acid metabolism
gkn01100
Metabolic pathways
gkn01110
Biosynthesis of secondary metabolites
gkn01120
Microbial metabolism in diverse environments
gkn01230
Biosynthesis of amino acids
Module
gkn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PVT67_18215 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PVT67_18215 (dapF)
Enzymes [BR:
gkn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PVT67_18215 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WKE65572
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Position
3700865..3701695
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AA seq
276 aa
AA seq
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MLVQFAKMHGLGNDFMVVDNVTQNVFFSAEQIQKLADRHTGIGFDQLLVVEPPYDPDLDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLINRNRIKVSTAKGKLTLNIDKDNLVSVNM
GVPVLEPAQVPFRAQKEEKTYILREGEHTFFAGVVSMGNPHCVLQVDSTQDADVAQIGPL
LGGSDRFPEGVNVGFMEVVSRDHVRLRVYERGAGETQACGSGACAAVVVGQLQDKLGKKV
RVDLPGGSLQINWAGPGEPLYMTGPAEHVYDGQIHL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctagttcagttcgccaagatgcacggcctgggcaacgacttcatggtggtggacaac
gtcacccagaacgtctttttctcggccgaacagatccagaagctggccgaccgccacacc
ggcatcggcttcgaccagctgctggtggtggagccgccctacgatccggacctcgacttc
cactaccgcatcttcaatgccgacggctccgaagtggagcagtgcggcaacggcgcccgc
tgtttcgcccgtttcgtgcgcctcaagggcctgatcaaccgcaaccgcatcaaggtctcc
acggccaagggcaagctgaccctcaacatcgacaaggacaacctggtctcggtcaacatg
ggggtgccggtgctggagccggcccaggtgcccttcagggcccagaaggaagagaagacc
tacatactgcgggaaggggaacacaccttcttcgccggtgtcgtgtccatgggtaacccc
cattgcgtattgcaggtggacagcacccaggacgccgacgtcgctcagattggcccgctg
ctggggggctcggaccgcttcccggaaggggtcaacgtcggcttcatggaagtggtgagc
cgcgaccatgtccggctgcgggtctatgagcgcggcgccggcgaaacccaggcctgcggc
agcggcgcctgcgccgccgtggtggtaggccagctccaggacaagttgggcaagaaggta
cgggtggatctgcccggcggcagcctccagatcaactgggccggcccgggggaacccctc
tacatgacgggcccggccgaacacgtgtacgacggacagatacacctatga
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