Gallaecimonas kandeliae: PVT67_18235
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Entry
PVT67_18235 CDS
T09225
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03420
Nucleotide excision repair
gkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PVT67_18235 (uvrD)
03430 Mismatch repair
PVT67_18235 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_18235 (uvrD)
Enzymes [BR:
gkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVT67_18235 (uvrD)
DNA repair and recombination proteins [BR:
gkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVT67_18235 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PVT67_18235 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WKE65576
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All DBs
Position
3703978..3706134
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AA seq
718 aa
AA seq
DB search
MTIAQLLEGLNGKQREAVAAPQSNLLVLAGAGSGKTRVLVHRIAYLIQALQVSPHAIMAV
TFTNKAASEMRGRVEQLLGGALRGLWLGTFHGLAHRLLRFHHQDARLPENFQILDSDDQL
RLVKRVMRSLNIDDKKWPPRQAMAYINTKKDDGLRPRHIDPQDPVERLWHQIYEAYQNAC
ELAGLVDFAELLLRALELLRDNPHLRDHYQARFRHILVDEFQDTNSIQYAWLRLLTGPQS
HVMIVGDDDQSIYGWRGARIDNIHRFLEDFAPATTIRLEQNYRSTGTILKAANGLITHNA
ERLGKDLWTEGQHGEPVSVYAGFNEIDEARFVVSRIQAWVDEGGRWSDCAILYRNNAQSR
VLEDALLRENLKYRIYGGLRFFERQEIKDALAYLRLMASRDDDAAFERVVNTPTRGIGDR
TIGIIRQQAREQGTTLWRAARQLLEAKVLSGRAGNAVQGFLTLVDGLEEQGCDQVLSRQV
DVAIKESGLLAHYQAEKGEKAQARVENLEELVSATQDFEPPEGAEEMSELNAFLAHAALE
SGDTQADEFEDAVQMMTMHTAKGLEFPLVFLVGVEEGMFPSMQSTTDPERLEEERRLCYV
GMTRAMKKLYLCYAESRRLYGRDEYHTPSRFLKEIPKDCLEEVRMRTQVSRPMAQYQKSS
DQFNETGLSLGQRVRHAKFGDGIIINYEGSGPQSRVQVAFDEAGPKWLVVAYARLESI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgcccagctgctggaaggccttaacggcaaacaacgggaggcggtggccgcc
ccccaaagcaacctgttggtgctggccggggccggctccggcaagacccgggtgctggtg
caccgcatcgcctacctgatccaggccctgcaggtgtccccccacgccatcatggccgtg
accttcaccaacaaggccgccagcgagatgcgcggccgggtggagcagctgctgggcggc
gccctgcgcggcctctggctcggcaccttccacggcctggcccaccggctgctgcgcttc
catcaccaggacgccaggctccccgagaacttccagatcctcgactccgacgaccagctg
cggctggtcaagagggtgatgcgcagcctcaatatcgacgacaagaaatggccgccgcgc
caggccatggcctacatcaacaccaagaaggacgacggcctgcgcccgcggcacatagac
ccccaggatccggtggaaaggctctggcaccagatctacgaggcttaccaaaacgcctgc
gaactggccggcctggtggattttgccgagctgctgctgcgggccctggagctgctgcgg
gataacccccatctgcgcgaccattaccaggcccgcttccgccacatactggtggacgag
ttccaggacaccaacagcatccagtacgcctggctgcggctgctgaccggcccccagagc
cacgtgatgatcgtcggcgacgacgaccagtccatctacggctggcgcggcgcccgcatc
gacaacatccaccgcttcctggaagacttcgccccggccaccaccatccgcctggagcag
aactacagatccacaggcaccattttgaaggccgccaacggcctcatcacccataacgcc
gagcgcctgggcaaggatctctggacagaaggccagcacggcgagccggtgtccgtctat
gccggcttcaacgaaatagacgaggcccgcttcgtggtcagccgcatccaggcctgggta
gacgagggcggccgctggtcggattgcgccatcctctaccgcaacaacgcccagtcgcgg
gtgctggaagatgccctgctgcgggaaaacctcaagtaccgcatctacggcggcctgcgc
ttcttcgaacgccaggagatcaaggacgccctggcctacctgcggctgatggcgagccgc
gacgacgacgccgccttcgagcgggtggtcaacacccccacccgcggcataggggaccgc
accataggcatcatccgccagcaggcccgcgagcagggcaccaccctgtggcgggccgcc
cgccagttgctggaagccaaggtgctgtcgggccgggccggcaacgccgtccagggcttc
ctgaccttggtggacggcctggaggagcagggctgcgaccaggtgctgagccgccaggtg
gacgtggccatcaaggaatccgggctcctggcccactaccaggccgagaagggcgagaag
gcccaggcgcgggtggagaacctggaggaactggtgtccgccacccaggacttcgagccc
cccgaaggggcggaggagatgagcgagctcaacgccttcctggcccacgccgccctggag
tccggcgacacccaggccgacgagttcgaggacgcggtgcagatgatgaccatgcacacc
gccaagggcctggagttcccgttggtgttcctggtgggggtggaagagggcatgttccct
tccatgcagtccaccaccgacccggagcgcctcgaggaagagcggcggctctgctatgtg
ggcatgacccgcgccatgaagaagctctacctctgctacgccgagtcgcgccgcctctac
ggccgcgacgagtaccacacccccagccgcttcctcaaggagatccccaaggactgcctg
gaggaggtgcggatgcgtacccaggtcagcaggcccatggcccagtaccagaagtccagc
gaccagttcaacgagacgggcctgagcctcggtcaacgggtgcgccacgccaaattcggc
gacggcatcatcatcaactacgaaggctcagggccccagtcgcgggtgcaggtggctttc
gatgaggcgggccccaagtggctggtggtcgcctatgccagattggagtcgatctaa
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