Giardia lamblia: GL50803_0010193
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Entry
GL50803_0010193 CDS
T01047
Name
(RefSeq) putative WD-repeat membrane protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
gla
Giardia lamblia
Pathway
gla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GL50803_0010193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gla03009
]
GL50803_0010193
Ribosome biogenesis [BR:
gla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GL50803_0010193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WDR55
Beta-prop_DCAF12
WD40
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Utp12
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
5699374
NCBI-ProteinID:
XP_001706485
UniProt:
A8BK93
LinkDB
All DBs
Position
1:complement(719208..722090)
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AA seq
960 aa
AA seq
DB search
MLSLSQIVGVIVDETPLAIGRLGVEYYAAASVGRGFLVYRADMLAPFVYSPALPDTIRQM
AVYSDKTVVMYQRKTELEIYTRGRLVAEISGLLHRPLCLVLQESTLVAFDASGRYIIYDL
ELMEQIKPPRSLPLEHPTDTCSLIMHPDTYLNKVLVVTSSGRMELHNIDKNKRVTALRQG
PNDISLAHGEPVVGIVNSPEIDVVAVIQPSRVSMVHLKKQRVLFALPCDLSGDSFTCATF
SSVHAIVFVGTEQGRIQAFDLDARRILCELKAHSMCVTSLFWLPDTYILSSGADNTIRIL
GYDSNLTVIQQIKHRTGHRGGVSLAKFYRENSSNIVHAAETCPFLLTAGLDKTLRYVQIY
QRNNSELFSSHDKQYPSEVIDFDACELRDEHWANVVTAHRGEDFCHLWAFYKNKELIEPL
PDRYLGREALEKREMAKLKKENGGVLPQDFVDARAAERFRSRYRVTLPTSVKFIENEDNL
TLVAGNGDDANENYLACRLSSESVSCCVISLCGNYVALAGTRSSAAVYALQSGRLVGCAP
CLFSHPDCLNRSVVRLSFSYDGLMLYAVNSIGYIVLFDIRARKAVKEVSLRSLLPDAEGG
DIVVTAVAFDVIRGLVSITSATALYVLDISQSSGIALSRMQSINIEVPHNCLSFFEHGQR
LVYGGSVDDSSPEMTGSHAAVIVYDILLDKIVAKQQFREFSAISSITVTSDNTVVAITFV
GVPGVYIYKNNEKYGLGIALDDAEYVEASLQAESAEKNIRRCLDLLTEGPQSLGIILHKD
SLLASRLYAVAMDRHATRELLEQYGGRLRRAGSASTKDRLPFYIGLQAKDHAQLSRAGSS
CFQRIFQMPSDASSLLPEITTLNHGIIDQEIQCLNDDSLSAFCSLLGSWAGHHSTTRTYA
SLDVFVVIFCCLLRYHALTISKSKELLSSLRPVYAIIEEQYNHITNSVNVITKLIDTLVY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgctctccctcagccagatcgtcggtgtcatcgtcgacgagaccccgctcgccatcgga
cgcctcggggtggagtactatgctgcggcgtctgttggccgcggatttcttgtttataga
gccgacatgcttgccccgtttgtctactctccggccctccccgacacaatccggcagatg
gctgtctatagtgataagaccgtagtcatgtaccagcgaaagacagagctcgaaatatac
actcgcggccggctggtagcagagatctccgggttgctccatcggcccctctgccttgta
cttcaggagtcgacgctggttgcatttgatgcgtctggacgatacattatatatgacttg
gagcttatggagcagataaagcctcctaggtctttgccacttgagcaccccacagacacc
tgtagtttgattatgcacccggacacatatctgaataaggtcttggtcgtgactagcagt
ggaaggatggagctccataatatagacaaaaacaagcgggtgactgcgttgcggcaagga
cccaacgacatttcccttgcacacggagagcccgtcgtgggcattgttaattccccagag
atagatgtcgtcgctgtgatccagccgtcgcgagtgtcaatggtgcacctcaagaagcag
cgcgtgctgttcgcgcttccgtgcgaccttagtggagatagctttacatgtgcaacgttc
tcctcagtacacgccatcgtctttgtgggtacagagcaagggcgcatccaagcctttgac
ctggacgcacgtcgaattctctgcgagctaaaggcccacagcatgtgcgttacttcgctc
ttctggctaccagacacatacatcctttcttctggcgcggataataccattcggattctg
gggtacgattccaacctgactgtcatacagcagattaagcatcgcacagggcatcgcgga
ggcgtgtccctggccaagttttaccgcgagaacagcagcaacatagtgcatgcagccgag
acttgtcctttcttgcttacagctggtttggacaagactctacgatacgtacagatctat
caaaggaacaattccgagcttttttcctcccatgacaagcagtatccatctgaggtcatt
gacttcgacgcctgtgagctccgtgatgagcattgggcaaatgttgtgactgcgcacaga
ggagaggacttctgtcatttgtgggcattctacaaaaacaaggagctaatagagcctctt
ccggacagatatctaggccgggaggctcttgagaagcgggaaatggccaagctcaagaag
gagaacggcggagtgcttcctcaggactttgttgatgctcgggctgcagagcgcttcaga
tcccgatatcgtgtcactctaccgacaagtgtgaaattcatcgagaacgaggataacctt
actctcgtagctggtaacggagatgatgccaatgaaaattatcttgcgtgccgcctgtcg
tcagaaagcgtcagctgctgcgtgatctccctctgtgggaactatgtcgcccttgctggg
acccgctccagtgccgccgtgtatgcgctacagagtggccgtctggtggggtgcgctccg
tgtttattctctcacccagactgtctaaaccggtctgttgttaggctatcattctcatat
gacggtctgatgctctacgcggtcaactccatagggtacatcgtcctatttgacatcaga
gcgcgcaaagcagtgaaggaggtcagcctgcgctcgctgctaccggacgcagagggaggt
gatatcgtggtgacagccgtagcctttgatgttatccgtggactggtctctataacgtcg
gcgacagcactctatgttctggacatatcgcagagctctggcatagctctcagccggatg
cagtctatcaacatagaggtcccccataactgcctatccttctttgagcatggccagcgg
ctcgtgtacggagggtctgtagatgatagctctccggaaatgaccggatcccatgctgct
gtaatcgtgtacgacatcctcttggataaaatcgttgccaagcagcagttcagggagttt
tctgcgatatcttctatcactgtgacgtctgataatactgtggtggcaataacattcgtg
ggtgtccctggtgtgtatatctataagaacaatgaaaagtatggtctcgggatagcgcta
gatgatgcggagtatgtagaggcttcgttgcaggctgagtcagccgagaagaacattcgc
cgctgcttggacctattgacagaaggcccgcagtcacttggaatcattctgcataaggac
agtctcctggcaagccgcttgtatgccgtggcaatggatcggcacgcgacacgggagctg
ctggagcaatacgggggtcgtctgcgccgggcgggctctgcatccacaaaggaccgcctt
ccattttacataggtctgcaggcgaaggaccacgcacagctttcacgcgcgggcagctct
tgcttccaaaggattttccagatgccaagtgatgcttcctcgttgctgcccgaaattact
actttgaaccacgggattatcgatcaagaaatccaatgtcttaatgacgattccctctcg
gcattttgttcgctgcttggtagttgggccggccatcactcaacaacaagaacgtacgct
agtcttgacgtgttcgttgtaatattctgctgcctcctccggtaccatgcacttacaata
agcaaatcgaaggagctcctatcgtcactgcgcccagtttacgctatcatcgaagagcag
tacaatcatatcacaaactccgtcaatgttatcacaaagctgattgatacattggtctat
tga
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