Giardia lamblia: GL50803_00113252
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Entry
GL50803_00113252 CDS
T01047
Name
(RefSeq) Msh2-like protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
gla
Giardia lamblia
Pathway
gla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GL50803_00113252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gla03400
]
GL50803_00113252
DNA repair and recombination proteins [BR:
gla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GL50803_00113252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_23
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
5698183
NCBI-ProteinID:
XP_001705306
UniProt:
E2RTP5
Q6WD97
LinkDB
All DBs
Position
5:complement(3615778..3618669)
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AA seq
963 aa
AA seq
DB search
MEQQWASPSLRRELLEALRDTAHLTSFKLFLVPSAGYLVLGDDVDALRRLMQVTVQYWKD
DGICDTETPEATAILVFSETEVERLVRAVFFSLKRGLDLFEERSDGRFVRTRSGSPGNLY
AFYELCPSLASNDTSVFAFIYVDHFSDAPSSAISGSRSSVASTEVVNVYIVYTDCQTTIG
GCILTDTPQLSNLSAQICQLSVREAAIVENKTLEGILVEQGLVYAVATETFKRSLGFDYD
AAHVRIRRLLLMEAYEVYASLLAQSRGAGLVTRIPFLNAKHAPVQGNQVLVACLISLLEH
VNLESLSEQSQHSQDSVDASSSVGTFLFEVPIFSSTMLYTMADMNSLKIVDYQSTTRKTL
YNLLNKTVTQHGALQLLRWLRAPTTDLAVISYRHDIVQYLSGEHLSGPLHASVRRTLRSC
PSFSRTAFLLRAYARAHQSSTIFSQLLDVYVFMRDTYGLIIDIFCDSSDANSNSTETSVV
ALATKLQELQIEILDFSQLIEKTFDLESPYLSKNVDTLFADPEEIYLCPGYSEELDALRR
DLDTNNASIQRDYLDIAESVKGCRLIFIPSQGYVIRAPKSSYARISSCSNVIVLENKANY
VKFTTEGLKNYSLQRMDAYNAYFLLQKEMEPEIVQKFAPFSQVLDRIGVLLAEIDCLASF
SYVSAGTLGETDNTMVWKWARPKISEAGSLRLIECKNPVLMSTIGTQSTVSNTIDFSSRI
LLLTGPNAGGKTTLLRSIGYCIVLAQIGCFVPCEAAYIPIQKRLSIRLGTGDCLSKGYST
FMYEMVSMSHILSSLNDASLVLIDELGRGTSTAEGFGISRGIVETLVQQPNCLALLSTHI
VELPASFAGVSAVKPVHMLSKMVNNQLRLLYRMNDGIIESTYGLDVASSMGIPQNILDDA
RTIINLTPKHTFRDCAVDKDYMGVLMELTGSLVGYQKGVLTREQLRMAHNRALKELRIAG
EAT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagtgggcatcgccatctctgcgcagagagctcttggaggctctccgagat
acagcacatttaacttcgttcaagctctttctagtgccttcagctggatacttagtactt
ggagatgatgtcgatgcattgaggagactcatgcaggtgacagtacagtactggaaggac
gacggtatttgtgatactgagacaccagaggctactgccatcttagtatttagtgagaca
gaggtagaaaggcttgtgagggcagtgtttttctcgctgaagcgagggcttgacctcttt
gaggaaaggagcgacgggcgctttgtacgaacacgctcaggatctccggggaatctttac
gccttctatgaactatgcccttctttggcatctaatgacacctctgtcttcgcattcatt
tatgttgatcacttcagtgatgctcccagcagtgccataagcggctcacggtcgagtgtg
gcttctacagaagtcgttaatgtgtatattgtatacactgactgtcaaacaaccatagga
ggctgtattctcactgacacgcctcaactgtccaatctttcagcgcagatctgccagcta
agtgtcagggaggcagctattgttgaaaataagacactagaaggcatcttagtggaacaa
ggtttggtatatgcggttgcaaccgaaacattcaagcgatctctaggctttgactatgat
gcagcccatgttcgcataaggcggctacttcttatggaagcgtatgaggtttatgcttct
cttctggcacagtcacgcggtgccggccttgtcacgaggatcccctttttaaatgcaaag
catgctccagttcaaggaaaccaagttcttgtggcgtgccttatttctcttttggagcac
gttaatttagaaagtctctctgagcaatctcaacactcccaagattctgttgatgcatcc
tcttctgtcggtactttcctttttgaggtgcccatcttttcatcgaccatgctctacaca
atggcagatatgaactctcttaaaatagtagactatcaatccactacgcgcaagacactc
tacaatcttttaaacaaaacagtcacgcaacacggagccctgcagctactcagatggctg
cgcgcccccactactgatcttgctgtcatttcatataggcacgatattgttcagtatctt
tcaggagagcatctgagcggaccgcttcatgcatctgtccggcggacacttcgatcatgc
ccctcattttcaagaaccgccttccttctacgtgcttatgcaagagcacatcagtcttct
accattttctcgcaacttcttgatgtctacgtattcatgcgtgacacttacgggctcatc
atcgatatcttctgcgactccagcgatgctaactccaactcaacagagacgtctgtggtt
gcattagccacaaagcttcaagagctccaaatagagatactagatttttcccagctcatt
gagaagacattcgatctcgagtctccgtatctctcaaagaatgtagacaccctctttgca
gatcctgaagagatatatctttgccctgggtacagcgaagaactagacgccttgcggaga
gatctagatactaacaatgcatctatacaaagagactacctagatattgcagagagcgtt
aaggggtgtaggttgattttcattccgtctcaaggatacgttattagggcaccaaagagc
tcgtatgcgcgcatctcaagttgttccaacgtcatagtgctagagaacaaggctaactat
gttaagtttactacagaggggctcaagaactactctctccaaagaatggatgcatataat
gcatacttcttgctacagaaggagatggaaccggaaattgtccaaaagttcgctccattt
agtcaagtgttagatagaattggagtgttgttggctgaaatagattgcctagcatctttt
tcatatgtttctgcaggtactcttggagagacagataatacaatggtgtggaagtgggct
cgaccaaagatatctgaggctggctcgttgcgcttaattgaatgcaaaaaccctgtcttg
atgagcacaattggaacacagtccacggtgagtaacaccattgacttcagctcacgaata
ctactcctcactggtcccaatgccggagggaagacaacgctgcttcgctctatcggatat
tgtattgtactagcacagattggctgctttgtcccttgtgaggccgcatacattcctatc
cagaagcgtctctctattagactgggtactggagactgtttgagtaaggggtactccact
tttatgtacgaaatggtaagcatgagtcacatcctgtcctctttgaacgatgcatcgctg
gtcctaatagatgagctgggaaggggcacttctaccgcagagggcttcggaatatctaga
ggcatagtggagacccttgtacagcagccgaactgtttggcccttctttccacacacata
gttgagctaccagccagttttgcaggggtcagtgctgtaaaacctgtgcacatgctgtct
aaaatggtcaataatcagctgaggctgctttatcgcatgaatgacggcatcatagagtcc
acctatggccttgatgtcgctagcagcatgggaattccccaaaacatcttggatgatgct
cggaccatcatcaatcttactccaaagcatacattcagagattgcgctgttgacaaggat
tacatgggtgttcttatggagttgacaggaagcctagttggctatcaaaagggagtcttg
actagagagcagctaagaatggctcacaatcgcgctttgaaagagcttcgtatcgctggt
gaagcaacctga
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