Giardia lamblia: GL50803_0011953
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Entry
GL50803_0011953 CDS
T01047
Name
(RefSeq) Coatomer alpha subunit
KO
K05236
coatomer subunit alpha
Organism
gla
Giardia lamblia
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gla04131
]
GL50803_0011953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gla04147
]
GL50803_0011953
Membrane trafficking [BR:
gla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
GL50803_0011953
Exosome [BR:
gla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GL50803_0011953
Exosomal proteins of bladder cancer cells
GL50803_0011953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
COPI_C
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
5702616
NCBI-ProteinID:
XP_001709692
UniProt:
A8B4T8
LinkDB
All DBs
Position
4:902813..906646
Genome browser
AA seq
1277 aa
AA seq
DB search
MVYAQLNLQTERVKCVVFHPKRPWVIFSCQNGVVELWDYVTKALIDKFRAHNSPVRCIDF
HPTQPLFVTGGDDATIKLWSLSDRKLLYVFTGHTDYVRSVFFHPDIHPYILSASDDNTAR
IWNWQSRQRVADLVGHRDLVMCARWHPTEDLIVTASMDATVRVWDISSIRTKGATGRFQQ
LAMQALSLPHTIISSSVVGTGHGRGVNWVSWMPDAGNYFLSGSDDTKCKLWHLTRGSSTG
LSLLGPDALLYCSSTIEKHTGNVSVVEPSVRNVILTAGVDGRLCLFSLSNRAYIGSITVH
DLDPTATVSSLAPSDHKMLRWWSLREHPTINMWAAGHDGGLCIFSTQLEESVGTVEGDTC
YFIDSHKLISTNLKAIVADASTKPTVKVEASLIKQTARSGAFGSSVVVVEPVDIIVMGNP
FPFIVSYWDGKNRFIVPYATLKDCSPSSYDPKNVIEVSSNVARLSASHVAWIQRSSEGLV
LAVAFVGTGGLTIKTMHPVSSTVLSVFPGRTESEVIISSPTKLSLYTLSNLSTNQPIVLL
KSLSVPQLIQHAYYSNDQQYLAVVAHEFVALINMDTFTINTSQMSHTAISRGVWGLIGRG
LEESEQRTANAFIYSTYTHICYMLPFISPTASEANRLAAHTQKISRVTKPIAGILTSLNR
PICIVSASGQVIVYLDRHEGLKCIEFDSRVAGLVQAVASGRADDASIMLARLQNTPLGLS
LSKTLLDMNRPDLALAALPKDEIQIRDELALNLGLLDHVCHDTKSQSANSYHIWLRIFAE
SLAQGQGLIARDALLKIARIDLLGFLLSLYNTTLSGSLSKLDYSRLSTSSSIQECLNAAV
LVGDKSLFHSTLLRAGLSIPAKIFGEANGIDTPVEQASAPPVSPTKTISIGKKITVPLRK
GSLRNYPTTSLLNTYESLMREIASAAEHELPAEGKRYQGWGSDDDDVDCVLPAEPVKGSV
QMTSGPSEPLDATQASEAAADSAIVVPSHGVNVVSKHPLLGSNSEKEEFLASNGILSEKS
LSILKPHIDKLASHNKRLQEVTPMKGLSIVVPISDSLSSVDTIDTMQREFSSIMEKVDTG
AFADALAPLRSLLQRALLACTFAGPNDHDDLSTLVLNSTLYILALSCELERRATEKVATP
ERVCELYVLFSLQNMKTNHALLALRLAISGTKRYGAYSHCKQLAQRFIQLSQLPEARSLD
VCQSYLPKAKKMAALEDEDVVQLSFSAADQDTVMLCAVSYKSIKGPHCICSACKTCACDQ
YLKASCPVCELGTFVKA
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggtctacgcgcagcttaacctacagacagagcgcgtcaagtgcgtggtttttcaccca
aagcgtccatgggttattttttcgtgccaaaacggcgttgtcgagctttgggattatgtg
accaaggctctcatcgacaagttccgtgcccacaactctcctgttcgctgcatcgacttt
cacccaactcaaccactctttgttacgggaggagatgatgcgacgattaagctctggtcg
ttgagcgatcgtaagcttctctatgtcttcacgggtcacacagactacgttcgcagcgtg
tttttccacccagacatccatccgtacattctctctgcatcagacgacaacactgcgcga
atttggaactggcagagtcgccaaagagttgcagacctagttggtcaccgcgacttggtc
atgtgcgcccgctggcatcccacagaagacctaattgttactgcgtctatggatgccacc
gtccgtgtgtgggacattagctctattcgaacgaagggggctacaggcagattccagcag
ctagcaatgcaagctctctccttgcctcataccataattagtagttctgtggtaggcaca
ggccatggcagaggcgttaactgggtctcatggatgccagacgccggcaactacttcctt
tcggggtctgacgatactaagtgcaagctttggcatctgactcgtggcagctctactggc
ctttcattgctgggacctgatgctcttctttattgctcctctaccatagaaaagcacacg
ggtaacgtttctgtagttgaaccatcagtaaggaacgtcattcttactgccggtgtcgat
ggtaggctttgtctcttctcattgtccaatcgtgcttatataggtagcattacggtgcac
gacctggatccgacagcaaccgtatcaagcctcgccccatctgatcataagatgttacgc
tggtggtcccttcgagaacatccgaccatcaatatgtgggccgcaggacatgacggtggc
ttatgcatattctccacacaactggaagagtcagtaggaacagtggagggggacacatgt
tacttcatcgattctcataagctcatctcgacaaatctgaaagccattgtcgctgatgct
agcacaaagccaactgtcaaggttgaggcttctcttatcaaacaaactgccaggagcggt
gcattcggctcatctgtcgttgtggtagagccagtggatatcatagttatgggaaacccg
tttcccttcatagtctcgtactgggacggaaagaacaggttcattgtgccgtacgcaacc
ttgaaagactgctctccaagcagctatgatccgaaaaatgttatagaagtctctagcaat
gtggccagactatctgcctcacacgtggcgtggatacaacggtctagtgaaggcctagtt
ctcgctgttgcctttgtgggtacaggggggctgacaattaagactatgcaccctgtttct
tccacagtcctctctgtcttcccaggaagaacggagtctgaagttatcatttcctctcca
acgaagctatctctttacaccttgagcaatctttcgacaaaccagcctattgtcctactc
aagtcgctatctgttcctcagttaattcagcacgcttactactctaatgaccaacaatat
ctcgcagtggtagctcacgagttcgtggctcttatcaatatggatacgtttactattaat
acgtctcaaatgtcgcatactgcgataagtcgcggggtatgggggcttattggccgtgga
ctggaggagtctgagcagcgcaccgccaatgcttttatctactccacctatacgcacata
tgttatatgttgccattcatctcaccaactgcttcggaagcaaatcgactagccgcccat
actcaaaagatatctagggtgactaagcctattgctgggattctgacgtcgctcaatagg
cctatttgcatagtctctgcatccggccaggtcattgtttacttggataggcacgaaggg
ctaaagtgcattgagtttgactccagggttgcaggactggtccaggctgttgcgtctggc
agagcggacgacgcctcgatcatgctggctcggttacagaacactcccctggggctgtct
ctctcaaagactttgctggatatgaataggcctgacttggctctcgccgcgctccctaaa
gatgagatacagatccgtgacgagcttgctcttaacttgggtcttctggaccatgtctgt
catgacacaaagtctcaatctgccaatagctaccacatttggcttcgtatttttgcagag
tctcttgcccaaggacagggcctcatcgccagggacgcccttctaaaaatagctcgcata
gacctcttaggctttctgctgtctctatataatactacgctatctgggtcgctaagcaag
ctggactatagtcgcctatctacttcttcgagcattcaagaatgtctgaacgctgcagta
ttagtaggggacaaatccctgttccactcgactctgcttcgcgccgggctctcaattcct
gctaagatatttggggaggctaatgggatagacactcccgtggagcaggcgagcgcacca
cctgtttccccaacaaagacgatttctataggcaaaaagatcaccgtgcccttacgcaag
ggaagcttgcgaaactaccccaccacctctttacttaatacatacgagtctcttatgcga
gagattgcctctgccgccgagcatgaacttccagctgaaggaaagcgctaccaaggatgg
ggcagtgacgatgacgacgttgactgcgtgttgccggctgagccggttaagggctccgta
cagatgacttcgggaccatctgagccactggatgcaactcaggcatctgaggcagctgcc
gattctgcaattgtagttccttctcatggagtcaacgtagtttcaaagcatcctcttctt
ggcagcaatagtgaaaaggaggaattccttgcctccaatggcattttgtcagagaagtcg
ctatccattctaaagcctcatattgacaagcttgcttcgcataacaagaggctgcaagag
gtcacccccatgaagggactatctatagttgttcccatctcagattcattgagtagtgta
gacacgatagatactatgcagcgagaatttagctcgataatggaaaaggttgatacaggt
gcattcgcagatgcactggctcctctgaggtcgctcctacaacgagctcttctagcctgc
acctttgcagggccaaatgaccacgatgacctttctacccttgtgctcaatagcacgctg
tatatattggcgttatcctgtgagctggagcggcgcgcaaccgagaaggttgctactccg
gagcgtgtgtgcgaactttatgtgcttttctcccttcagaatatgaagacaaaccacgcg
ctgttggcattgcgcttggctataagcggtacaaagcggtacggcgcgtattcgcactgc
aaacagctagcccaacgattcattcaattaagccagcttcctgaggcgcgttctctggat
gtctgccaatcctacttacccaaggcaaagaagatggctgcattagaggatgaggatgtg
gtgcaactgagcttcagtgctgccgatcaggacacggtcatgctctgcgccgtttcatac
aaaagcatcaagggaccccactgtatttgtagcgcctgtaagacgtgtgcatgcgatcaa
tatctaaaggccagttgccctgtctgcgagcttggcacctttgtgaaggcctaa
DBGET
integrated database retrieval system
