KEGG   Giardia lamblia: GL50803_0013225
Entry
GL50803_0013225   CDS       T01047                                 
Name
(RefSeq) Zinc finger domain
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
gla  Giardia lamblia
Pathway
gla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GL50803_0013225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gla03021]
    GL50803_0013225
   03019 Messenger RNA biogenesis [BR:gla03019]
    GL50803_0013225
Transcription machinery [BR:gla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     GL50803_0013225
Messenger RNA biogenesis [BR:gla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     GL50803_0013225
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH_4 Torus zf-CCCH_12 zf-CCCH zf-CCCH_3
Other DBs
NCBI-GeneID: 5700138
NCBI-ProteinID: XP_001707233
UniProt: A8BFA9
LinkDB
Position
4:complement(<221565..>222359)
AA seq 264 aa
MNYALESCFRTQNSEQLNTFIRDKIGIYAHMETDSSRKTNKTVCKHYIRDQCKKGDDCEF
IHEYAIDKLDLCKFGDNCTNHYCIYNHKSSKRADVCYSFARGVCLNKTCDSRHIVYTLCP
RYLAGFCPEGPNCTMQHPQLSGPITIYTRQVMKKPGYIGHCSHCCKYHGDAHELTDNDKK
DRYNAHHGQTSIEDNTDFTGMLLQCPAAKDGSRLVRDHAMINKVFEHTPENFRRLYDILR
EIEASERADRARARANKEIEDEDA
NT seq 795 nt   +upstreamnt  +downstreamnt
atgaactatgccttggagtcctgcttccgaacgcagaactctgagcagctcaacacgttc
attcgcgataagatagggatatatgcacacatggagacagatagtagtaggaagactaat
aagaccgtctgtaagcactacatccgagaccagtgtaagaaaggagatgactgcgagttt
atccatgagtacgctattgacaagctcgatctgtgcaagtttggagataattgcaccaac
cactactgcatttacaaccacaagagctctaagcgtgccgatgtctgctattcattcgca
cgcggtgtctgcctcaataaaacatgcgattccaggcacatagtgtacacgctctgccct
cggtacctcgcaggcttctgtcccgaaggccccaattgtacaatgcagcacccccagctg
tctggtcccattaccatatacacgcgccaggtcatgaagaagccgggctatattggccac
tgcagccactgctgcaagtatcacggcgatgctcatgagctcaccgacaacgacaagaaa
gatcgctacaacgctcatcacggacagacctcaatagaggataacacagacttcactggg
atgttgctacaatgtcctgctgccaaagacgggtcccggctcgtccgtgaccacgctatg
atcaacaaagtctttgagcacacgcccgaaaacttccgccgcctctatgacattttgcgc
gaaatcgaagccagcgaacgcgccgatcgggcccgtgcgcgggcaaacaaggaaatcgaa
gacgaagacgcctag

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