KEGG   Giardia lamblia: GL50803_0013512
Entry
GL50803_0013512   CDS       T01047                                 
Name
(RefSeq) TFIIH P34
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
gla  Giardia lamblia
Pathway
gla03022  Basal transcription factors
gla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GL50803_0013512
  09124 Replication and repair
   03420 Nucleotide excision repair
    GL50803_0013512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gla03021]
    GL50803_0013512
   03400 DNA repair and recombination proteins [BR:gla03400]
    GL50803_0013512
Transcription machinery [BR:gla03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GL50803_0013512
DNA repair and recombination proteins [BR:gla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GL50803_0013512
SSDB
Motif
Pfam: Tfb4 DUF5612
Other DBs
NCBI-GeneID: 5702359
NCBI-ProteinID: XP_001709436
UniProt: A8B6C2
LinkDB
Position
5:1404350..1405189
AA seq 279 aa
MDHIVALFDANLTSYTSEDFTESQVLDLVDATVSWLSAHRQSSPYAIWNLYGFSTNVLHS
CSSYSIINEKLAGELQAPEAVRRSLGEALRYCPQATSVTGLALLSAIAAVARVQSIVSSL
SESSGINMMYHGRILIITASGVQDSEVVNSALFSAKRFNVKIDIVSLTTIPDVNIFLRQV
AYLTASKFSNVPKPKASGSSVSYFTTHIFKASPAAEWRSLQLNDGASAGMYHREKRLDFM
GECSVCHANISHGIACAVCFTLQCDTCFNGSCPTCPATV
NT seq 840 nt   +upstreamnt  +downstreamnt
atggatcatatcgtggccctctttgacgcaaatttgacttcgtacacctcagaagacttt
actgaatcgcaggtgttggacttggtagatgcaaccgtgtcttggttgagtgcccacaga
cagtcttctccttatgccatttggaacttgtatggcttctcgaccaatgtcctgcactct
tgttctagctatagcattattaacgagaagcttgctggggaactccaggccccagaagca
gtcaggcgctcgttgggagaagcccttcgctactgcccccaagccacatcagtgaccggg
cttgcgcttctctcggctattgctgctgtggcgcgtgttcaaagtattgtgagttccctt
tccgaatctagcggcatcaacatgatgtaccatgggcgcattcttattataacagcgtct
ggtgtacaagattctgaagtcgttaattcagcactcttttcagcgaagcggtttaatgtc
aagatagatatcgtctcactgaccaccatccccgacgttaacatcttcttgaggcaggtc
gcctacctaacggccagcaagttttccaatgtgccgaagcccaaggcttccggtagtagt
gtctcctacttcactacgcacatcttcaaggcttctcctgctgctgagtggaggtcgcta
cagctcaatgatggtgctagcgccggaatgtaccatcgggaaaagcggcttgacttcatg
ggagagtgcagtgtttgtcatgctaacataagccatgggattgcctgtgctgtctgcttc
actcttcagtgtgatacttgcttcaacggctcttgccccacttgtcctgctacagtgtaa

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